RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
CAST-204ENST00000341926 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
CAST-204ENST00000341926 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
CAST-204ENST00000341926 MYT1Q01538 1121 aa15.1■□□□□ 0.01
CAST-204ENST00000341926 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
CAST-204ENST00000341926 PRKCSHP14314 528 aaPredicted RBP14.04□□□□□ -0.16
CAST-204ENST00000341926 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
CAST-204ENST00000341926 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
CAST-204ENST00000341926 ERICH6Q7L0X2 663 aa13.92□□□□□ -0.18
CAST-204ENST00000341926 APLP2Q06481 763 aa13.91□□□□□ -0.18
CAST-204ENST00000341926 HRCP23327 699 aa13.68□□□□□ -0.22
CAST-204ENST00000341926 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
CAST-204ENST00000341926 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
CAST-204ENST00000341926 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
CAST-204ENST00000341926 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
CAST-204ENST00000341926 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
CAST-204ENST00000341926 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
CAST-204ENST00000341926 PPARGC1BQ86YN6 1023 aaKnown RBP13.01□□□□□ -0.33
CAST-204ENST00000341926 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
CAST-204ENST00000341926 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
CAST-204ENST00000341926 ABCC9O60706 1549 aa12.91□□□□□ -0.34
CAST-204ENST00000341926 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
CAST-204ENST00000341926 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
CAST-204ENST00000341926 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
CAST-204ENST00000341926 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
CAST-204ENST00000341926 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
CAST-204ENST00000341926 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
CAST-204ENST00000341926 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
CAST-204ENST00000341926 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
CAST-204ENST00000341926 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
CAST-204ENST00000341926 PCGF6Q9BYE7 350 aa12.57□□□□□ -0.4
CAST-204ENST00000341926 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
CAST-204ENST00000341926 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
CAST-204ENST00000341926 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
CAST-204ENST00000341926 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
CAST-204ENST00000341926 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
CAST-204ENST00000341926 ADRA2BP18089 450 aa12.45□□□□□ -0.42
CAST-204ENST00000341926 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
CAST-204ENST00000341926 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
CAST-204ENST00000341926 KCNA4P22459 653 aa12.35□□□□□ -0.43
CAST-204ENST00000341926 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
CAST-204ENST00000341926 ARXQ96QS3 562 aa12.28□□□□□ -0.44
CAST-204ENST00000341926 MYO15BQ96JP2 1530 aa12.25□□□□□ -0.45
CAST-204ENST00000341926 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
CAST-204ENST00000341926 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
CAST-204ENST00000341926 RANGAP1P46060 587 aaPredicted RBP12.23□□□□□ -0.45
CAST-204ENST00000341926 RB1CC1Q8TDY2 1594 aa12.23□□□□□ -0.45
CAST-204ENST00000341926 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
CAST-204ENST00000341926 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
CAST-204ENST00000341926 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
CAST-204ENST00000341926 NEFLP07196 543 aa12.16□□□□□ -0.46
CAST-204ENST00000341926 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
CAST-204ENST00000341926 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
CAST-204ENST00000341926 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
CAST-204ENST00000341926 PDIA4P13667 645 aaKnown RBP12.06□□□□□ -0.48
CAST-204ENST00000341926 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
CAST-204ENST00000341926 NACADO15069 1562 aa12.03□□□□□ -0.48
CAST-204ENST00000341926 PDE4CQ08493 712 aa12.02□□□□□ -0.48
CAST-204ENST00000341926 UNC13AQ9UPW8 1703 aa11.96□□□□□ -0.49
CAST-204ENST00000341926 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.5
CAST-204ENST00000341926 DIEXFQ68CQ4 756 aaKnown RBP11.94□□□□□ -0.5
CAST-204ENST00000341926 FGD1P98174 961 aa11.93□□□□□ -0.5
CAST-204ENST00000341926 DEKP35659 375 aaKnown RBP11.92□□□□□ -0.5
CAST-204ENST00000341926 FOXD1Q16676 465 aa11.91□□□□□ -0.5
CAST-204ENST00000341926 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
CAST-204ENST00000341926 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
CAST-204ENST00000341926 GLIPR1L2Q4G1C9 344 aa11.86□□□□□ -0.51
CAST-204ENST00000341926 BICRAQ9NZM4 1560 aa11.86□□□□□ -0.51
CAST-204ENST00000341926 TAF7LQ5H9L4 462 aa11.83□□□□□ -0.52
CAST-204ENST00000341926 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
CAST-204ENST00000341926 SHROOM4Q9ULL8 1493 aa11.81□□□□□ -0.52
CAST-204ENST00000341926 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
CAST-204ENST00000341926 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
CAST-204ENST00000341926 AAMPQ13685 434 aa11.8□□□□□ -0.52
CAST-204ENST00000341926 HOMEZQ8IX15 550 aa11.79□□□□□ -0.52
CAST-204ENST00000341926 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
CAST-204ENST00000341926 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
CAST-204ENST00000341926 ZMYND15Q9H091 742 aa11.77□□□□□ -0.53
CAST-204ENST00000341926 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
CAST-204ENST00000341926 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
CAST-204ENST00000341926 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
CAST-204ENST00000341926 MSH5O43196 834 aa11.74□□□□□ -0.53
CAST-204ENST00000341926 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
CAST-204ENST00000341926 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
CAST-204ENST00000341926 RSPH6AQ9H0K4 717 aa11.69□□□□□ -0.54
CAST-204ENST00000341926 RBM10P98175 930 aaKnown RBP11.69□□□□□ -0.54
CAST-204ENST00000341926 A0A0U1RQG5 324 aaPredicted RBP11.66□□□□□ -0.54
CAST-204ENST00000341926 YTHDC1Q96MU7 727 aaKnown RBP11.64□□□□□ -0.55
CAST-204ENST00000341926 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
CAST-204ENST00000341926 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
CAST-204ENST00000341926 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
CAST-204ENST00000341926 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
CAST-204ENST00000341926 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
CAST-204ENST00000341926 BRD2P25440 801 aaKnown RBP11.59□□□□□ -0.55
CAST-204ENST00000341926 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
CAST-204ENST00000341926 ZNF326Q5BKZ1 582 aaKnown RBP11.59□□□□□ -0.55
CAST-204ENST00000341926 C11orf95C9JLR9 678 aaPredicted RBP11.53□□□□□ -0.56
CAST-204ENST00000341926 CUX2O14529 1486 aa11.52□□□□□ -0.56
CAST-204ENST00000341926 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
CAST-204ENST00000341926 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms