RNA–Protein interactions for RNA: ENST00000311420.13

MDM2-204, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-204ENST00000311420 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
MDM2-204ENST00000311420 ABCC9O60706 1549 aa24.3■■□□□ 1.48
MDM2-204ENST00000311420 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
MDM2-204ENST00000311420 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
MDM2-204ENST00000311420 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
MDM2-204ENST00000311420 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
MDM2-204ENST00000311420 NACADO15069 1562 aa22.81■■□□□ 1.24
MDM2-204ENST00000311420 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
MDM2-204ENST00000311420 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
MDM2-204ENST00000311420 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
MDM2-204ENST00000311420 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
MDM2-204ENST00000311420 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
MDM2-204ENST00000311420 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
MDM2-204ENST00000311420 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
MDM2-204ENST00000311420 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
MDM2-204ENST00000311420 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
MDM2-204ENST00000311420 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
MDM2-204ENST00000311420 EIF4G1Q04637 1599 aaKnown RBP21.8■■□□□ 1.08
MDM2-204ENST00000311420 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
MDM2-204ENST00000311420 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
MDM2-204ENST00000311420 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
MDM2-204ENST00000311420 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
MDM2-204ENST00000311420 SMARCA4P51532 1647 aa20.94■□□□□ 0.94
MDM2-204ENST00000311420 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
MDM2-204ENST00000311420 CUX2O14529 1486 aa20.89■□□□□ 0.93
MDM2-204ENST00000311420 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
MDM2-204ENST00000311420 NESP48681 1621 aa20.86■□□□□ 0.93
MDM2-204ENST00000311420 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.93
MDM2-204ENST00000311420 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
MDM2-204ENST00000311420 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
MDM2-204ENST00000311420 PEG3Q9GZU2 1588 aa20.73■□□□□ 0.91
MDM2-204ENST00000311420 LAMC3Q9Y6N6 1575 aa20.58■□□□□ 0.88
MDM2-204ENST00000311420 PDS5BQ9NTI5 1447 aa20.54■□□□□ 0.88
MDM2-204ENST00000311420 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
MDM2-204ENST00000311420 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.87
MDM2-204ENST00000311420 WIZO95785 1651 aa20.45■□□□□ 0.86
MDM2-204ENST00000311420 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
MDM2-204ENST00000311420 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
MDM2-204ENST00000311420 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
MDM2-204ENST00000311420 WDR62O43379 1518 aa20.27■□□□□ 0.84
MDM2-204ENST00000311420 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
MDM2-204ENST00000311420 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
MDM2-204ENST00000311420 CFTRP13569 1480 aa20.23■□□□□ 0.83
MDM2-204ENST00000311420 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
MDM2-204ENST00000311420 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
MDM2-204ENST00000311420 URB2Q14146 1524 aaKnown RBP20.09■□□□□ 0.81
MDM2-204ENST00000311420 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
MDM2-204ENST00000311420 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
MDM2-204ENST00000311420 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
MDM2-204ENST00000311420 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
MDM2-204ENST00000311420 TOPBP1Q92547 1522 aa19.84■□□□□ 0.77
MDM2-204ENST00000311420 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
MDM2-204ENST00000311420 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
MDM2-204ENST00000311420 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.759e-7■■■■□ 20
MDM2-204ENST00000311420 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
MDM2-204ENST00000311420 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
MDM2-204ENST00000311420 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
MDM2-204ENST00000311420 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
MDM2-204ENST00000311420 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
MDM2-204ENST00000311420 FBLN2P98095 1184 aa19.66■□□□□ 0.74
MDM2-204ENST00000311420 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
MDM2-204ENST00000311420 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
MDM2-204ENST00000311420 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
MDM2-204ENST00000311420 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
MDM2-204ENST00000311420 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
MDM2-204ENST00000311420 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
MDM2-204ENST00000311420 SOGA1O94964 1423 aa19.61■□□□□ 0.73
MDM2-204ENST00000311420 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
MDM2-204ENST00000311420 CHD1O14646 1710 aa19.49■□□□□ 0.71
MDM2-204ENST00000311420 CUX1P39880 1505 aa19.48■□□□□ 0.71
MDM2-204ENST00000311420 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
MDM2-204ENST00000311420 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
MDM2-204ENST00000311420 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
MDM2-204ENST00000311420 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
MDM2-204ENST00000311420 TRHP20396 242 aaPredicted RBP19.41■□□□□ 0.7
MDM2-204ENST00000311420 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
MDM2-204ENST00000311420 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
MDM2-204ENST00000311420 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
MDM2-204ENST00000311420 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
MDM2-204ENST00000311420 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
MDM2-204ENST00000311420 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
MDM2-204ENST00000311420 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
MDM2-204ENST00000311420 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
MDM2-204ENST00000311420 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
MDM2-204ENST00000311420 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
MDM2-204ENST00000311420 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
MDM2-204ENST00000311420 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
MDM2-204ENST00000311420 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
MDM2-204ENST00000311420 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
MDM2-204ENST00000311420 NUP160Q12769 1436 aa19.09■□□□□ 0.65
MDM2-204ENST00000311420 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
MDM2-204ENST00000311420 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
MDM2-204ENST00000311420 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
MDM2-204ENST00000311420 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
MDM2-204ENST00000311420 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
MDM2-204ENST00000311420 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
MDM2-204ENST00000311420 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
MDM2-204ENST00000311420 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
MDM2-204ENST00000311420 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
MDM2-204ENST00000311420 IGF1RP08069 1367 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms