RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 NISCHQ9Y2I1 1504 aa26.86■■□□□ 1.89
CAST-223ENST00000508608 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
CAST-223ENST00000508608 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
CAST-223ENST00000508608 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
CAST-223ENST00000508608 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
CAST-223ENST00000508608 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
CAST-223ENST00000508608 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
CAST-223ENST00000508608 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
CAST-223ENST00000508608 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
CAST-223ENST00000508608 ABCC9O60706 1549 aa21.56■■□□□ 1.04
CAST-223ENST00000508608 HRCP23327 699 aa21.47■■□□□ 1.03
CAST-223ENST00000508608 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
CAST-223ENST00000508608 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
CAST-223ENST00000508608 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
CAST-223ENST00000508608 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
CAST-223ENST00000508608 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
CAST-223ENST00000508608 NACADO15069 1562 aa21.12■□□□□ 0.97
CAST-223ENST00000508608 TRIM26Q12899 539 aaPredicted RBP20.97■□□□□ 0.95
CAST-223ENST00000508608 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
CAST-223ENST00000508608 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.92
CAST-223ENST00000508608 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
CAST-223ENST00000508608 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
CAST-223ENST00000508608 WIZO95785 1651 aa20.75■□□□□ 0.91
CAST-223ENST00000508608 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
CAST-223ENST00000508608 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
CAST-223ENST00000508608 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
CAST-223ENST00000508608 EIF4G1Q04637 1599 aaKnown RBP20.61■□□□□ 0.89
CAST-223ENST00000508608 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
CAST-223ENST00000508608 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
CAST-223ENST00000508608 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
CAST-223ENST00000508608 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
CAST-223ENST00000508608 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
CAST-223ENST00000508608 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
CAST-223ENST00000508608 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
CAST-223ENST00000508608 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
CAST-223ENST00000508608 EEA1Q15075 1411 aa20.2■□□□□ 0.82
CAST-223ENST00000508608 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
CAST-223ENST00000508608 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
CAST-223ENST00000508608 TNIKQ9UKE5 1360 aa20.11■□□□□ 0.81
CAST-223ENST00000508608 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
CAST-223ENST00000508608 SOGA1O94964 1423 aa20.07■□□□□ 0.8
CAST-223ENST00000508608 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
CAST-223ENST00000508608 GOLGA3Q08378 1498 aa20.01■□□□□ 0.79
CAST-223ENST00000508608 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
CAST-223ENST00000508608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
CAST-223ENST00000508608 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
CAST-223ENST00000508608 KIF21BO75037 1637 aa19.92■□□□□ 0.78
CAST-223ENST00000508608 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
CAST-223ENST00000508608 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
CAST-223ENST00000508608 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
CAST-223ENST00000508608 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
CAST-223ENST00000508608 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
CAST-223ENST00000508608 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
CAST-223ENST00000508608 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
CAST-223ENST00000508608 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
CAST-223ENST00000508608 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
CAST-223ENST00000508608 CLIP1P30622 1438 aa19.73■□□□□ 0.75
CAST-223ENST00000508608 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
CAST-223ENST00000508608 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
CAST-223ENST00000508608 VPS8Q8N3P4 1428 aa19.69■□□□□ 0.74
CAST-223ENST00000508608 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
CAST-223ENST00000508608 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
CAST-223ENST00000508608 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
CAST-223ENST00000508608 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
CAST-223ENST00000508608 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.73
CAST-223ENST00000508608 APLP2Q06481 763 aa19.56■□□□□ 0.72
CAST-223ENST00000508608 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
CAST-223ENST00000508608 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
CAST-223ENST00000508608 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
CAST-223ENST00000508608 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
CAST-223ENST00000508608 PRXQ9BXM0 1461 aa19.47■□□□□ 0.71
CAST-223ENST00000508608 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
CAST-223ENST00000508608 CUX1P39880 1505 aa19.4■□□□□ 0.7
CAST-223ENST00000508608 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
CAST-223ENST00000508608 ARAP1Q96P48 1450 aa19.39■□□□□ 0.7
CAST-223ENST00000508608 KIF27Q86VH2 1401 aa19.37■□□□□ 0.69
CAST-223ENST00000508608 GTF3C3Q9Y5Q9 886 aa19.36■□□□□ 0.69
CAST-223ENST00000508608 CLSPNQ9HAW4 1339 aa19.35■□□□□ 0.69
CAST-223ENST00000508608 CFTRP13569 1480 aa19.34■□□□□ 0.69
CAST-223ENST00000508608 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.68
CAST-223ENST00000508608 RRBP1Q9P2E9 1410 aaKnown RBP19.25■□□□□ 0.67
CAST-223ENST00000508608 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
CAST-223ENST00000508608 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
CAST-223ENST00000508608 MIER1Q8N108 512 aa19.2■□□□□ 0.66
CAST-223ENST00000508608 CUX2O14529 1486 aa19.19■□□□□ 0.66
CAST-223ENST00000508608 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
CAST-223ENST00000508608 YTHDC1Q96MU7 727 aaKnown RBP19.15■□□□□ 0.66
CAST-223ENST00000508608 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
CAST-223ENST00000508608 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
CAST-223ENST00000508608 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
CAST-223ENST00000508608 IGF1RP08069 1367 aa19.06■□□□□ 0.64
CAST-223ENST00000508608 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
CAST-223ENST00000508608 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
CAST-223ENST00000508608 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.64
CAST-223ENST00000508608 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
CAST-223ENST00000508608 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
CAST-223ENST00000508608 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
CAST-223ENST00000508608 RAB3GAP2Q9H2M9 1393 aa18.94■□□□□ 0.62
CAST-223ENST00000508608 PCF11O94913 1555 aaKnown RBP18.92■□□□□ 0.62
CAST-223ENST00000508608 MAPKBP1O60336 1514 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms