RNA–Protein interactions for RNA: ENST00000468989.1

CDK5RAP2-207, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 4

Gene CDK5RAP2, Length 577 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-207ENST00000468989 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
CDK5RAP2-207ENST00000468989 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
CDK5RAP2-207ENST00000468989 ABCC9O60706 1549 aa16.7■□□□□ 0.26
CDK5RAP2-207ENST00000468989 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
CDK5RAP2-207ENST00000468989 NACADO15069 1562 aa15.92■□□□□ 0.14
CDK5RAP2-207ENST00000468989 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
CDK5RAP2-207ENST00000468989 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
CDK5RAP2-207ENST00000468989 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP2-207ENST00000468989 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
CDK5RAP2-207ENST00000468989 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
CDK5RAP2-207ENST00000468989 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
CDK5RAP2-207ENST00000468989 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
CDK5RAP2-207ENST00000468989 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
CDK5RAP2-207ENST00000468989 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
CDK5RAP2-207ENST00000468989 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
CDK5RAP2-207ENST00000468989 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP2-207ENST00000468989 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
CDK5RAP2-207ENST00000468989 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
CDK5RAP2-207ENST00000468989 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
CDK5RAP2-207ENST00000468989 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
CDK5RAP2-207ENST00000468989 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
CDK5RAP2-207ENST00000468989 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP2-207ENST00000468989 SMARCA2P51531 1590 aa14.63□□□□□ -0.07
CDK5RAP2-207ENST00000468989 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
CDK5RAP2-207ENST00000468989 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
CDK5RAP2-207ENST00000468989 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
CDK5RAP2-207ENST00000468989 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP2-207ENST00000468989 WIZO95785 1651 aa14.46□□□□□ -0.1
CDK5RAP2-207ENST00000468989 NESP48681 1621 aa14.44□□□□□ -0.1
CDK5RAP2-207ENST00000468989 RSF1Q96T23 1441 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP2-207ENST00000468989 ERCC6Q03468 1493 aa14.35□□□□□ -0.11
CDK5RAP2-207ENST00000468989 LAMC3Q9Y6N6 1575 aa14.32□□□□□ -0.12
CDK5RAP2-207ENST00000468989 CUX2O14529 1486 aa14.28□□□□□ -0.12
CDK5RAP2-207ENST00000468989 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.12
CDK5RAP2-207ENST00000468989 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP2-207ENST00000468989 KIF21AQ7Z4S6 1674 aa14.24□□□□□ -0.13
CDK5RAP2-207ENST00000468989 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP2-207ENST00000468989 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
CDK5RAP2-207ENST00000468989 CFTRP13569 1480 aa14.16□□□□□ -0.14
CDK5RAP2-207ENST00000468989 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
CDK5RAP2-207ENST00000468989 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
CDK5RAP2-207ENST00000468989 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
CDK5RAP2-207ENST00000468989 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
CDK5RAP2-207ENST00000468989 WDR62O43379 1518 aa14.07□□□□□ -0.16
CDK5RAP2-207ENST00000468989 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
CDK5RAP2-207ENST00000468989 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
CDK5RAP2-207ENST00000468989 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
CDK5RAP2-207ENST00000468989 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP2-207ENST00000468989 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
CDK5RAP2-207ENST00000468989 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
CDK5RAP2-207ENST00000468989 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
CDK5RAP2-207ENST00000468989 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
CDK5RAP2-207ENST00000468989 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP2-207ENST00000468989 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP2-207ENST00000468989 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP2-207ENST00000468989 CUX1P39880 1505 aa13.71□□□□□ -0.21
CDK5RAP2-207ENST00000468989 RAD54L2Q9Y4B4 1467 aa13.7□□□□□ -0.22
CDK5RAP2-207ENST00000468989 AQRO60306 1485 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDK5RAP2-207ENST00000468989 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
CDK5RAP2-207ENST00000468989 EIF4G3O43432 1585 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP2-207ENST00000468989 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
CDK5RAP2-207ENST00000468989 SOGA1O94964 1423 aa13.67□□□□□ -0.22
CDK5RAP2-207ENST00000468989 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP2-207ENST00000468989 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
CDK5RAP2-207ENST00000468989 CHD1O14646 1710 aa13.56□□□□□ -0.24
CDK5RAP2-207ENST00000468989 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
CDK5RAP2-207ENST00000468989 BIVM-ERCC5R4GMW8 1640 aa13.54□□□□□ -0.24
CDK5RAP2-207ENST00000468989 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
CDK5RAP2-207ENST00000468989 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
CDK5RAP2-207ENST00000468989 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
CDK5RAP2-207ENST00000468989 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
CDK5RAP2-207ENST00000468989 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
CDK5RAP2-207ENST00000468989 FBLN2P98095 1184 aa13.51□□□□□ -0.25
CDK5RAP2-207ENST00000468989 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
CDK5RAP2-207ENST00000468989 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
CDK5RAP2-207ENST00000468989 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
CDK5RAP2-207ENST00000468989 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
CDK5RAP2-207ENST00000468989 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
CDK5RAP2-207ENST00000468989 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
CDK5RAP2-207ENST00000468989 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP2-207ENST00000468989 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
CDK5RAP2-207ENST00000468989 ARHGEF11O15085 1522 aa13.47□□□□□ -0.25
CDK5RAP2-207ENST00000468989 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
CDK5RAP2-207ENST00000468989 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP2-207ENST00000468989 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
CDK5RAP2-207ENST00000468989 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
CDK5RAP2-207ENST00000468989 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
CDK5RAP2-207ENST00000468989 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
CDK5RAP2-207ENST00000468989 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
CDK5RAP2-207ENST00000468989 GRIN2AQ12879 1464 aa13.35□□□□□ -0.27
CDK5RAP2-207ENST00000468989 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
CDK5RAP2-207ENST00000468989 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
CDK5RAP2-207ENST00000468989 NUP160Q12769 1436 aa13.3□□□□□ -0.28
CDK5RAP2-207ENST00000468989 IGF1RP08069 1367 aa13.28□□□□□ -0.28
CDK5RAP2-207ENST00000468989 ERCC6L2Q5T890 1561 aa13.26□□□□□ -0.29
CDK5RAP2-207ENST00000468989 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
CDK5RAP2-207ENST00000468989 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
CDK5RAP2-207ENST00000468989 CUL7Q14999 1698 aa13.18□□□□□ -0.3
CDK5RAP2-207ENST00000468989 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
CDK5RAP2-207ENST00000468989 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms