RNA–Protein interactions for RNA: ENST00000510156.5

CAST-230, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5

Gene CAST, Length 2,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-230ENST00000510156 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
CAST-230ENST00000510156 CCDC180Q9P1Z9 1646 aa18.87■□□□□ 0.61
CAST-230ENST00000510156 ABCC9O60706 1549 aa18.63■□□□□ 0.57
CAST-230ENST00000510156 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
CAST-230ENST00000510156 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
CAST-230ENST00000510156 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
CAST-230ENST00000510156 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
CAST-230ENST00000510156 NACADO15069 1562 aa17.75■□□□□ 0.43
CAST-230ENST00000510156 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
CAST-230ENST00000510156 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
CAST-230ENST00000510156 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
CAST-230ENST00000510156 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CAST-230ENST00000510156 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
CAST-230ENST00000510156 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
CAST-230ENST00000510156 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
CAST-230ENST00000510156 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.36
CAST-230ENST00000510156 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
CAST-230ENST00000510156 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
CAST-230ENST00000510156 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
CAST-230ENST00000510156 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
CAST-230ENST00000510156 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
CAST-230ENST00000510156 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
CAST-230ENST00000510156 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
CAST-230ENST00000510156 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
CAST-230ENST00000510156 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
CAST-230ENST00000510156 NCAPD3P42695 1498 aa16.41■□□□□ 0.22
CAST-230ENST00000510156 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
CAST-230ENST00000510156 WIZO95785 1651 aa16.33■□□□□ 0.21
CAST-230ENST00000510156 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
CAST-230ENST00000510156 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
CAST-230ENST00000510156 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
CAST-230ENST00000510156 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
CAST-230ENST00000510156 NESP48681 1621 aa16.15■□□□□ 0.18
CAST-230ENST00000510156 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
CAST-230ENST00000510156 CUX2O14529 1486 aa16.13■□□□□ 0.17
CAST-230ENST00000510156 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
CAST-230ENST00000510156 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
CAST-230ENST00000510156 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
CAST-230ENST00000510156 ERCC6Q03468 1493 aa16■□□□□ 0.15
CAST-230ENST00000510156 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
CAST-230ENST00000510156 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
CAST-230ENST00000510156 CCDC88BA6NC98 1476 aa15.94■□□□□ 0.14
CAST-230ENST00000510156 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
CAST-230ENST00000510156 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
CAST-230ENST00000510156 CFTRP13569 1480 aa15.86■□□□□ 0.13
CAST-230ENST00000510156 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
CAST-230ENST00000510156 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
CAST-230ENST00000510156 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
CAST-230ENST00000510156 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
CAST-230ENST00000510156 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
CAST-230ENST00000510156 PRDM2Q13029 1718 aa15.71■□□□□ 0.1
CAST-230ENST00000510156 URB2Q14146 1524 aaKnown RBP15.66■□□□□ 0.1
CAST-230ENST00000510156 WDR62O43379 1518 aa15.66■□□□□ 0.1
CAST-230ENST00000510156 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
CAST-230ENST00000510156 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
CAST-230ENST00000510156 ILDR1Q86SU0 546 aaPredicted RBP15.49■□□□□ 0.07
CAST-230ENST00000510156 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
CAST-230ENST00000510156 CUX1P39880 1505 aa15.45■□□□□ 0.06
CAST-230ENST00000510156 ABCC8Q09428 1581 aa15.44■□□□□ 0.06
CAST-230ENST00000510156 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
CAST-230ENST00000510156 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
CAST-230ENST00000510156 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
CAST-230ENST00000510156 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
CAST-230ENST00000510156 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
CAST-230ENST00000510156 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
CAST-230ENST00000510156 SOGA1O94964 1423 aa15.36■□□□□ 0.05
CAST-230ENST00000510156 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■□ 23
CAST-230ENST00000510156 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
CAST-230ENST00000510156 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.05
CAST-230ENST00000510156 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.05
CAST-230ENST00000510156 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
CAST-230ENST00000510156 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
CAST-230ENST00000510156 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
CAST-230ENST00000510156 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
CAST-230ENST00000510156 FBLN2P98095 1184 aa15.2■□□□□ 0.02
CAST-230ENST00000510156 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
CAST-230ENST00000510156 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
CAST-230ENST00000510156 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
CAST-230ENST00000510156 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
CAST-230ENST00000510156 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
CAST-230ENST00000510156 CHD1O14646 1710 aa15.15■□□□□ 0.02
CAST-230ENST00000510156 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
CAST-230ENST00000510156 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
CAST-230ENST00000510156 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
CAST-230ENST00000510156 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
CAST-230ENST00000510156 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
CAST-230ENST00000510156 SYNJ2O15056 1496 aa15.04■□□□□ -0
CAST-230ENST00000510156 ADAMTS12P58397 1594 aa15□□□□□ -0.01
CAST-230ENST00000510156 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
CAST-230ENST00000510156 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
CAST-230ENST00000510156 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
CAST-230ENST00000510156 IGF1RP08069 1367 aa14.97□□□□□ -0.01
CAST-230ENST00000510156 GRIN2AQ12879 1464 aa14.96□□□□□ -0.01
CAST-230ENST00000510156 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
CAST-230ENST00000510156 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
CAST-230ENST00000510156 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
CAST-230ENST00000510156 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
CAST-230ENST00000510156 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
CAST-230ENST00000510156 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
CAST-230ENST00000510156 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms