RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.84
CAST-244ENST00000515663 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
CAST-244ENST00000515663 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
CAST-244ENST00000515663 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
CAST-244ENST00000515663 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
CAST-244ENST00000515663 DCAF1Q9Y4B6 1507 aa16.88■□□□□ 0.29
CAST-244ENST00000515663 ABCC9O60706 1549 aa16.77■□□□□ 0.28
CAST-244ENST00000515663 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
CAST-244ENST00000515663 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
CAST-244ENST00000515663 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
CAST-244ENST00000515663 NACADO15069 1562 aa16.58■□□□□ 0.24
CAST-244ENST00000515663 PHF23Q9BUL5 403 aaPredicted RBP16.42■□□□□ 0.22
CAST-244ENST00000515663 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
CAST-244ENST00000515663 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
CAST-244ENST00000515663 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
CAST-244ENST00000515663 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
CAST-244ENST00000515663 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
CAST-244ENST00000515663 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
CAST-244ENST00000515663 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
CAST-244ENST00000515663 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
CAST-244ENST00000515663 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
CAST-244ENST00000515663 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
CAST-244ENST00000515663 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
CAST-244ENST00000515663 SMARCA4P51532 1647 aa15.6■□□□□ 0.09
CAST-244ENST00000515663 FOXD1Q16676 465 aa15.56■□□□□ 0.08
CAST-244ENST00000515663 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
CAST-244ENST00000515663 WIZO95785 1651 aa15.48■□□□□ 0.07
CAST-244ENST00000515663 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
CAST-244ENST00000515663 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
CAST-244ENST00000515663 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
CAST-244ENST00000515663 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
CAST-244ENST00000515663 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
CAST-244ENST00000515663 HMGXB3Q12766 1538 aa15.27■□□□□ 0.04
CAST-244ENST00000515663 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
CAST-244ENST00000515663 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
CAST-244ENST00000515663 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
CAST-244ENST00000515663 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
CAST-244ENST00000515663 CFTRP13569 1480 aa14.94□□□□□ -0.02
CAST-244ENST00000515663 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
CAST-244ENST00000515663 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
CAST-244ENST00000515663 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
CAST-244ENST00000515663 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
CAST-244ENST00000515663 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
CAST-244ENST00000515663 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
CAST-244ENST00000515663 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
CAST-244ENST00000515663 MSH5O43196 834 aa14.75□□□□□ -0.05
CAST-244ENST00000515663 NESP48681 1621 aa14.71□□□□□ -0.05
CAST-244ENST00000515663 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
CAST-244ENST00000515663 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
CAST-244ENST00000515663 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
CAST-244ENST00000515663 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
CAST-244ENST00000515663 CUX1P39880 1505 aa14.66□□□□□ -0.06
CAST-244ENST00000515663 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
CAST-244ENST00000515663 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
CAST-244ENST00000515663 EEA1Q15075 1411 aa14.58□□□□□ -0.08
CAST-244ENST00000515663 SOGA1O94964 1423 aa14.56□□□□□ -0.08
CAST-244ENST00000515663 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
CAST-244ENST00000515663 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
CAST-244ENST00000515663 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.09
CAST-244ENST00000515663 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
CAST-244ENST00000515663 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
CAST-244ENST00000515663 RUSC2Q8N2Y8 1516 aa14.5□□□□□ -0.09
CAST-244ENST00000515663 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
CAST-244ENST00000515663 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
CAST-244ENST00000515663 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
CAST-244ENST00000515663 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
CAST-244ENST00000515663 LOC105371045A0A1W2PR82 267 aa14.46□□□□□ -0.09
CAST-244ENST00000515663 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.09
CAST-244ENST00000515663 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
CAST-244ENST00000515663 KIF27Q86VH2 1401 aa14.42□□□□□ -0.1
CAST-244ENST00000515663 ABCA10Q8WWZ4 1543 aa14.41□□□□□ -0.1
CAST-244ENST00000515663 WDR62O43379 1518 aa14.4□□□□□ -0.1
CAST-244ENST00000515663 CUX2O14529 1486 aa14.37□□□□□ -0.11
CAST-244ENST00000515663 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
CAST-244ENST00000515663 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
CAST-244ENST00000515663 PRXQ9BXM0 1461 aa14.35□□□□□ -0.11
CAST-244ENST00000515663 THOC2Q8NI27 1593 aaKnown RBP14.35□□□□□ -0.11
CAST-244ENST00000515663 KIF21BO75037 1637 aa14.35□□□□□ -0.11
CAST-244ENST00000515663 IGF1RP08069 1367 aa14.34□□□□□ -0.11
CAST-244ENST00000515663 WDR97A6NE52 1622 aa14.33□□□□□ -0.12
CAST-244ENST00000515663 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
CAST-244ENST00000515663 GOLGA3Q08378 1498 aa14.32□□□□□ -0.12
CAST-244ENST00000515663 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
CAST-244ENST00000515663 TNIKQ9UKE5 1360 aa14.3□□□□□ -0.12
CAST-244ENST00000515663 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
CAST-244ENST00000515663 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
CAST-244ENST00000515663 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.13
CAST-244ENST00000515663 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
CAST-244ENST00000515663 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
CAST-244ENST00000515663 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
CAST-244ENST00000515663 ADRA2BP18089 450 aa14.24□□□□□ -0.13
CAST-244ENST00000515663 CARMIL1Q5VZK9 1371 aa14.24□□□□□ -0.13
CAST-244ENST00000515663 UBTFP17480 764 aaKnown RBP14.19□□□□□ -0.14
CAST-244ENST00000515663 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
CAST-244ENST00000515663 CUL7Q14999 1698 aa14.18□□□□□ -0.14
CAST-244ENST00000515663 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■■■■□ 24.7
CAST-244ENST00000515663 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
CAST-244ENST00000515663 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
CAST-244ENST00000515663 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
CAST-244ENST00000515663 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms