RNA–Protein interactions for RNA: ENST00000508830.5

CAST-224, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-224ENST00000508830 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
CAST-224ENST00000508830 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
CAST-224ENST00000508830 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
CAST-224ENST00000508830 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
CAST-224ENST00000508830 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
CAST-224ENST00000508830 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
CAST-224ENST00000508830 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
CAST-224ENST00000508830 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
CAST-224ENST00000508830 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
CAST-224ENST00000508830 HRCP23327 699 aa26.1■■□□□ 1.77
CAST-224ENST00000508830 PCGF6Q9BYE7 350 aa26.09■■□□□ 1.77
CAST-224ENST00000508830 LOC105371045A0A1W2PR82 267 aa26.03■■□□□ 1.76
CAST-224ENST00000508830 ABCC9O60706 1549 aa25.86■■□□□ 1.73
CAST-224ENST00000508830 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
CAST-224ENST00000508830 PPARGC1BQ86YN6 1023 aaKnown RBP25.76■■□□□ 1.71
CAST-224ENST00000508830 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
CAST-224ENST00000508830 RB1CC1Q8TDY2 1594 aa25.54■■□□□ 1.68
CAST-224ENST00000508830 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
CAST-224ENST00000508830 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
CAST-224ENST00000508830 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.65
CAST-224ENST00000508830 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
CAST-224ENST00000508830 EHMT2Q96KQ7 1210 aa25.31■■□□□ 1.64
CAST-224ENST00000508830 MROH2BQ7Z745 1585 aa25.25■■□□□ 1.63
CAST-224ENST00000508830 NACADO15069 1562 aa25.22■■□□□ 1.63
CAST-224ENST00000508830 WIZO95785 1651 aa25.12■■□□□ 1.61
CAST-224ENST00000508830 BAZ1AQ9NRL2 1556 aaPredicted RBP24.85■■□□□ 1.57
CAST-224ENST00000508830 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
CAST-224ENST00000508830 ZEB1P37275 1124 aaPredicted RBP24.74■■□□□ 1.55
CAST-224ENST00000508830 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
CAST-224ENST00000508830 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
CAST-224ENST00000508830 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
CAST-224ENST00000508830 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
CAST-224ENST00000508830 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
CAST-224ENST00000508830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
CAST-224ENST00000508830 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
CAST-224ENST00000508830 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
CAST-224ENST00000508830 SOGA1O94964 1423 aa24.48■■□□□ 1.51
CAST-224ENST00000508830 PABPN1Q86U42 306 aaKnown RBP eCLIP24.41■■□□□ 1.5
CAST-224ENST00000508830 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.49
CAST-224ENST00000508830 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
CAST-224ENST00000508830 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
CAST-224ENST00000508830 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
CAST-224ENST00000508830 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
CAST-224ENST00000508830 BICRAQ9NZM4 1560 aa24.24■■□□□ 1.47
CAST-224ENST00000508830 CSRNP3Q8WYN3 585 aa24.24■■□□□ 1.47
CAST-224ENST00000508830 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
CAST-224ENST00000508830 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
CAST-224ENST00000508830 EEA1Q15075 1411 aa24.13■■□□□ 1.45
CAST-224ENST00000508830 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
CAST-224ENST00000508830 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
CAST-224ENST00000508830 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
CAST-224ENST00000508830 DIEXFQ68CQ4 756 aaKnown RBP23.96■■□□□ 1.43
CAST-224ENST00000508830 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
CAST-224ENST00000508830 NEUROD1Q13562 356 aa23.92■■□□□ 1.42
CAST-224ENST00000508830 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.41
CAST-224ENST00000508830 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
CAST-224ENST00000508830 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
CAST-224ENST00000508830 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
CAST-224ENST00000508830 CLIP1P30622 1438 aa23.85■■□□□ 1.41
CAST-224ENST00000508830 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
CAST-224ENST00000508830 RAPGEF2Q9Y4G8 1499 aa23.84■■□□□ 1.41
CAST-224ENST00000508830 KIF21BO75037 1637 aa23.84■■□□□ 1.41
CAST-224ENST00000508830 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
CAST-224ENST00000508830 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
CAST-224ENST00000508830 GTF3C3Q9Y5Q9 886 aa23.66■■□□□ 1.38
CAST-224ENST00000508830 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
CAST-224ENST00000508830 APLP2Q06481 763 aa23.59■■□□□ 1.37
CAST-224ENST00000508830 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
CAST-224ENST00000508830 YTHDC1Q96MU7 727 aaKnown RBP23.54■■□□□ 1.36
CAST-224ENST00000508830 PELP1Q8IZL8 1130 aaKnown RBP23.54■■□□□ 1.36
CAST-224ENST00000508830 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
CAST-224ENST00000508830 MIER1Q8N108 512 aa23.51■■□□□ 1.35
CAST-224ENST00000508830 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
CAST-224ENST00000508830 KANK4Q5T7N3 995 aaPredicted RBP23.48■■□□□ 1.35
CAST-224ENST00000508830 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
CAST-224ENST00000508830 CUX1P39880 1505 aa23.46■■□□□ 1.35
CAST-224ENST00000508830 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
CAST-224ENST00000508830 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
CAST-224ENST00000508830 HMGXB3Q12766 1538 aa23.36■■□□□ 1.33
CAST-224ENST00000508830 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.32
CAST-224ENST00000508830 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
CAST-224ENST00000508830 CFTRP13569 1480 aa23.28■■□□□ 1.32
CAST-224ENST00000508830 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
CAST-224ENST00000508830 ITGAEP38570 1179 aa23.2■■□□□ 1.3
CAST-224ENST00000508830 RRBP1Q9P2E9 1410 aaKnown RBP23.2■■□□□ 1.3
CAST-224ENST00000508830 CUX2O14529 1486 aa23.13■■□□□ 1.29
CAST-224ENST00000508830 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
CAST-224ENST00000508830 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
CAST-224ENST00000508830 IGF1RP08069 1367 aa23.12■■□□□ 1.29
CAST-224ENST00000508830 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
CAST-224ENST00000508830 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
CAST-224ENST00000508830 CADPSQ9ULU8 1353 aa22.99■■□□□ 1.27
CAST-224ENST00000508830 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
CAST-224ENST00000508830 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
CAST-224ENST00000508830 P3H3Q8IVL6 736 aa22.98■■□□□ 1.27
CAST-224ENST00000508830 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
CAST-224ENST00000508830 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
CAST-224ENST00000508830 MAPKBP1O60336 1514 aa22.93■■□□□ 1.26
CAST-224ENST00000508830 LRRC9Q6ZRR7 1453 aa22.89■■□□□ 1.26
CAST-224ENST00000508830 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms