RNA–Protein interactions for RNA: ENST00000320640.10

ITFG1-201, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITFG1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-201ENST00000320640 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
ITFG1-201ENST00000320640 HRCP23327 699 aa25.99■■□□□ 1.75
ITFG1-201ENST00000320640 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.74
ITFG1-201ENST00000320640 PCGF6Q9BYE7 350 aa25.69■■□□□ 1.7
ITFG1-201ENST00000320640 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
ITFG1-201ENST00000320640 PELP1Q8IZL8 1130 aaKnown RBP25.39■■□□□ 1.66
ITFG1-201ENST00000320640 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
ITFG1-201ENST00000320640 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
ITFG1-201ENST00000320640 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
ITFG1-201ENST00000320640 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
ITFG1-201ENST00000320640 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
ITFG1-201ENST00000320640 MYT1Q01538 1121 aa24.37■■□□□ 1.49
ITFG1-201ENST00000320640 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.48
ITFG1-201ENST00000320640 NEUROD1Q13562 356 aa24.23■■□□□ 1.47
ITFG1-201ENST00000320640 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
ITFG1-201ENST00000320640 ACIN1Q9UKV3 1341 aaKnown RBP24.14■■□□□ 1.45
ITFG1-201ENST00000320640 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
ITFG1-201ENST00000320640 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
ITFG1-201ENST00000320640 EHMT2Q96KQ7 1210 aa24■■□□□ 1.43
ITFG1-201ENST00000320640 CENPBP07199 599 aaPredicted RBP23.8■■□□□ 1.4
ITFG1-201ENST00000320640 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
ITFG1-201ENST00000320640 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.4
ITFG1-201ENST00000320640 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
ITFG1-201ENST00000320640 FAM9AQ8IZU1 332 aaPredicted RBP23.69■■□□□ 1.38
ITFG1-201ENST00000320640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
ITFG1-201ENST00000320640 DIEXFQ68CQ4 756 aaKnown RBP23.64■■□□□ 1.38
ITFG1-201ENST00000320640 CCER1Q8TC90 406 aaPredicted RBP23.57■■□□□ 1.36
ITFG1-201ENST00000320640 TTBK1Q5TCY1 1321 aaPredicted RBP23.43■■□□□ 1.34
ITFG1-201ENST00000320640 BCL11AQ9H165 835 aa23.33■■□□□ 1.33
ITFG1-201ENST00000320640 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
ITFG1-201ENST00000320640 MIER1Q8N108 512 aa23.05■■□□□ 1.28
ITFG1-201ENST00000320640 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
ITFG1-201ENST00000320640 ANP32EQ9BTT0 268 aa22.95■■□□□ 1.26
ITFG1-201ENST00000320640 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
ITFG1-201ENST00000320640 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
ITFG1-201ENST00000320640 TSHZ2Q9NRE2 1034 aa22.77■■□□□ 1.24
ITFG1-201ENST00000320640 SUPT16HQ9Y5B9 1047 aaKnown RBP22.76■■□□□ 1.23
ITFG1-201ENST00000320640 BCANQ96GW7 911 aa22.73■■□□□ 1.23
ITFG1-201ENST00000320640 PRKCSHP14314 528 aaPredicted RBP22.61■■□□□ 1.21
ITFG1-201ENST00000320640 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
ITFG1-201ENST00000320640 ITGAEP38570 1179 aa22.3■■□□□ 1.16
ITFG1-201ENST00000320640 FKBP8Q14318 412 aa22.27■■□□□ 1.16
ITFG1-201ENST00000320640 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
ITFG1-201ENST00000320640 RBM19Q9Y4C8 960 aaKnown RBP22.23■■□□□ 1.15
ITFG1-201ENST00000320640 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
ITFG1-201ENST00000320640 ERICH6Q7L0X2 663 aa22.13■■□□□ 1.13
ITFG1-201ENST00000320640 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
ITFG1-201ENST00000320640 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
ITFG1-201ENST00000320640 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
ITFG1-201ENST00000320640 MSH5O43196 834 aa22.08■■□□□ 1.13
ITFG1-201ENST00000320640 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
ITFG1-201ENST00000320640 ANO8Q9HCE9 1232 aaPredicted RBP22.01■■□□□ 1.11
ITFG1-201ENST00000320640 NEFLP07196 543 aa21.98■■□□□ 1.11
ITFG1-201ENST00000320640 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
ITFG1-201ENST00000320640 TRIM52Q96A61 297 aa21.92■■□□□ 1.1
ITFG1-201ENST00000320640 ABCC9O60706 1549 aa21.9■■□□□ 1.1
ITFG1-201ENST00000320640 IRX6P78412 446 aaPredicted RBP21.87■■□□□ 1.09
ITFG1-201ENST00000320640 DEKP35659 375 aaKnown RBP21.86■■□□□ 1.09
ITFG1-201ENST00000320640 CCDC136Q96JN2 1154 aa21.85■■□□□ 1.09
ITFG1-201ENST00000320640 NBR1Q14596 966 aa21.82■■□□□ 1.08
ITFG1-201ENST00000320640 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
ITFG1-201ENST00000320640 APLP2Q06481 763 aa21.75■■□□□ 1.07
ITFG1-201ENST00000320640 DDX10Q13206 875 aaKnown RBP21.74■■□□□ 1.07
ITFG1-201ENST00000320640 SALL2Q9Y467 1007 aaPredicted RBP21.74■■□□□ 1.07
ITFG1-201ENST00000320640 RTN4Q9NQC3 1192 aaKnown RBP21.73■■□□□ 1.07
ITFG1-201ENST00000320640 HIRIP3Q9BW71 556 aaPredicted RBP21.7■■□□□ 1.06
ITFG1-201ENST00000320640 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
ITFG1-201ENST00000320640 SOGA1O94964 1423 aa21.66■■□□□ 1.06
ITFG1-201ENST00000320640 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.65■■□□□ 1.06
ITFG1-201ENST00000320640 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
ITFG1-201ENST00000320640 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
ITFG1-201ENST00000320640 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
ITFG1-201ENST00000320640 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
ITFG1-201ENST00000320640 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
ITFG1-201ENST00000320640 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
ITFG1-201ENST00000320640 FANCIQ9NVI1 1328 aa21.53■■□□□ 1.04
ITFG1-201ENST00000320640 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
ITFG1-201ENST00000320640 IL27Q8NEV9 243 aa21.49■■□□□ 1.03
ITFG1-201ENST00000320640 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
ITFG1-201ENST00000320640 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
ITFG1-201ENST00000320640 MROH2BQ7Z745 1585 aa21.38■■□□□ 1.01
ITFG1-201ENST00000320640 ANP32CO43423 234 aa21.37■■□□□ 1.01
ITFG1-201ENST00000320640 B4GALNT3Q6L9W6 998 aa21.37■■□□□ 1.01
ITFG1-201ENST00000320640 NOP58Q9Y2X3 529 aaKnown RBP21.35■■□□□ 1.01
ITFG1-201ENST00000320640 MYT1LQ9UL68 1186 aa21.35■■□□□ 1.01
ITFG1-201ENST00000320640 RTL5Q5HYW3 569 aaPredicted RBP21.33■■□□□ 1.01
ITFG1-201ENST00000320640 WIZO95785 1651 aa21.33■■□□□ 1
ITFG1-201ENST00000320640 CLIP1P30622 1438 aa21.32■■□□□ 1
ITFG1-201ENST00000320640 EIF5BO60841 1220 aaKnown RBP21.3■■□□□ 1
ITFG1-201ENST00000320640 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
ITFG1-201ENST00000320640 GOLGA3Q08378 1498 aa21.27■■□□□ 1
ITFG1-201ENST00000320640 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
ITFG1-201ENST00000320640 PPP1R15AO75807 674 aaPredicted RBP21.18■□□□□ 0.98
ITFG1-201ENST00000320640 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
ITFG1-201ENST00000320640 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
ITFG1-201ENST00000320640 NPM2Q86SE8 214 aaKnown RBP21.14■□□□□ 0.98
ITFG1-201ENST00000320640 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.97
ITFG1-201ENST00000320640 PPP4R2Q9NY27 417 aa21.13■□□□□ 0.97
ITFG1-201ENST00000320640 CNGB1Q14028 1251 aaPredicted RBP21.12■□□□□ 0.97
ITFG1-201ENST00000320640 ERICH6BQ5W0A0 696 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms