RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
CAST-206ENST00000395812 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.35
CAST-206ENST00000395812 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
CAST-206ENST00000395812 SHROOM4Q9ULL8 1493 aa21.7■■□□□ 1.06
CAST-206ENST00000395812 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
CAST-206ENST00000395812 ABCC9O60706 1549 aa20.92■□□□□ 0.94
CAST-206ENST00000395812 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
CAST-206ENST00000395812 APLP2Q06481 763 aa20.64■□□□□ 0.89
CAST-206ENST00000395812 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
CAST-206ENST00000395812 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
CAST-206ENST00000395812 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
CAST-206ENST00000395812 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
CAST-206ENST00000395812 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
CAST-206ENST00000395812 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
CAST-206ENST00000395812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
CAST-206ENST00000395812 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
CAST-206ENST00000395812 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
CAST-206ENST00000395812 FBLN2P98095 1184 aa19.71■□□□□ 0.75
CAST-206ENST00000395812 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
CAST-206ENST00000395812 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
CAST-206ENST00000395812 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
CAST-206ENST00000395812 PCGF6Q9BYE7 350 aa19.28■□□□□ 0.68
CAST-206ENST00000395812 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
CAST-206ENST00000395812 NACADO15069 1562 aa19.23■□□□□ 0.67
CAST-206ENST00000395812 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
CAST-206ENST00000395812 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
CAST-206ENST00000395812 ITGAEP38570 1179 aa19.19■□□□□ 0.66
CAST-206ENST00000395812 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
CAST-206ENST00000395812 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
CAST-206ENST00000395812 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
CAST-206ENST00000395812 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
CAST-206ENST00000395812 ERCC6Q03468 1493 aa18.96■□□□□ 0.63
CAST-206ENST00000395812 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
CAST-206ENST00000395812 ARID3CA6NKF2 412 aa18.93■□□□□ 0.62
CAST-206ENST00000395812 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
CAST-206ENST00000395812 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
CAST-206ENST00000395812 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
CAST-206ENST00000395812 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CAST-206ENST00000395812 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
CAST-206ENST00000395812 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
CAST-206ENST00000395812 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
CAST-206ENST00000395812 POLR3GLQ9BT43 218 aa18.75■□□□□ 0.59
CAST-206ENST00000395812 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
CAST-206ENST00000395812 BCANQ96GW7 911 aa18.74■□□□□ 0.59
CAST-206ENST00000395812 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
CAST-206ENST00000395812 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
CAST-206ENST00000395812 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
CAST-206ENST00000395812 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
CAST-206ENST00000395812 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
CAST-206ENST00000395812 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
CAST-206ENST00000395812 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
CAST-206ENST00000395812 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
CAST-206ENST00000395812 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
CAST-206ENST00000395812 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.55
CAST-206ENST00000395812 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
CAST-206ENST00000395812 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
CAST-206ENST00000395812 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
CAST-206ENST00000395812 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
CAST-206ENST00000395812 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
CAST-206ENST00000395812 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
CAST-206ENST00000395812 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
CAST-206ENST00000395812 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.54
CAST-206ENST00000395812 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
CAST-206ENST00000395812 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
CAST-206ENST00000395812 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
CAST-206ENST00000395812 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
CAST-206ENST00000395812 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
CAST-206ENST00000395812 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
CAST-206ENST00000395812 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
CAST-206ENST00000395812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.519e-7■■■□□ 17.1
CAST-206ENST00000395812 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
CAST-206ENST00000395812 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
CAST-206ENST00000395812 NEFLP07196 543 aa18.17■□□□□ 0.5
CAST-206ENST00000395812 EEA1Q15075 1411 aa18.15■□□□□ 0.5
CAST-206ENST00000395812 CHIC2Q9UKJ5 165 aa18.15■□□□□ 0.5
CAST-206ENST00000395812 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
CAST-206ENST00000395812 CUX2O14529 1486 aa18.11■□□□□ 0.49
CAST-206ENST00000395812 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
CAST-206ENST00000395812 SOGA1O94964 1423 aa18.1■□□□□ 0.49
CAST-206ENST00000395812 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
CAST-206ENST00000395812 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
CAST-206ENST00000395812 NEFMP07197 916 aa18.07■□□□□ 0.48
CAST-206ENST00000395812 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
CAST-206ENST00000395812 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
CAST-206ENST00000395812 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
CAST-206ENST00000395812 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
CAST-206ENST00000395812 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
CAST-206ENST00000395812 CLIP1P30622 1438 aa18.05■□□□□ 0.48
CAST-206ENST00000395812 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
CAST-206ENST00000395812 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
CAST-206ENST00000395812 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
CAST-206ENST00000395812 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
CAST-206ENST00000395812 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
CAST-206ENST00000395812 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
CAST-206ENST00000395812 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.47
CAST-206ENST00000395812 MLECQ14165 292 aa17.95■□□□□ 0.46
CAST-206ENST00000395812 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
CAST-206ENST00000395812 JPH4Q96JJ6 628 aa17.88■□□□□ 0.45
CAST-206ENST00000395812 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
CAST-206ENST00000395812 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms