RNA–Protein interactions for RNA: ENST00000354886.6

SLC38A6-202, Transcript of solute carrier family 38 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC38A6, Length 1,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-202ENST00000354886 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.7
SLC38A6-202ENST00000354886 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
SLC38A6-202ENST00000354886 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
SLC38A6-202ENST00000354886 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
SLC38A6-202ENST00000354886 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
SLC38A6-202ENST00000354886 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
SLC38A6-202ENST00000354886 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
SLC38A6-202ENST00000354886 ABCC9O60706 1549 aa31.03■■■□□ 2.56
SLC38A6-202ENST00000354886 NACADO15069 1562 aa30.83■■■□□ 2.53
SLC38A6-202ENST00000354886 SCRIBQ14160 1630 aa30.5■■■□□ 2.47
SLC38A6-202ENST00000354886 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
SLC38A6-202ENST00000354886 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
SLC38A6-202ENST00000354886 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
SLC38A6-202ENST00000354886 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
SLC38A6-202ENST00000354886 CECR2Q9BXF3 1484 aa29.56■■■□□ 2.32
SLC38A6-202ENST00000354886 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
SLC38A6-202ENST00000354886 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
SLC38A6-202ENST00000354886 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
SLC38A6-202ENST00000354886 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
SLC38A6-202ENST00000354886 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
SLC38A6-202ENST00000354886 WIZO95785 1651 aa29.26■■■□□ 2.27
SLC38A6-202ENST00000354886 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
SLC38A6-202ENST00000354886 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
SLC38A6-202ENST00000354886 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
SLC38A6-202ENST00000354886 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
SLC38A6-202ENST00000354886 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
SLC38A6-202ENST00000354886 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.17
SLC38A6-202ENST00000354886 CCDC88BA6NC98 1476 aa28.64■■■□□ 2.17
SLC38A6-202ENST00000354886 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
SLC38A6-202ENST00000354886 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
SLC38A6-202ENST00000354886 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
SLC38A6-202ENST00000354886 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
SLC38A6-202ENST00000354886 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.1
SLC38A6-202ENST00000354886 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
SLC38A6-202ENST00000354886 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
SLC38A6-202ENST00000354886 LOC105371045A0A1W2PR82 267 aa27.89■■■□□ 2.06
SLC38A6-202ENST00000354886 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
SLC38A6-202ENST00000354886 CFTRP13569 1480 aa27.86■■■□□ 2.05
SLC38A6-202ENST00000354886 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
SLC38A6-202ENST00000354886 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
SLC38A6-202ENST00000354886 EEA1Q15075 1411 aa27.72■■■□□ 2.03
SLC38A6-202ENST00000354886 TOP2BQ02880 1626 aa27.71■■■□□ 2.03
SLC38A6-202ENST00000354886 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.03
SLC38A6-202ENST00000354886 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
SLC38A6-202ENST00000354886 SOGA1O94964 1423 aa27.62■■■□□ 2.01
SLC38A6-202ENST00000354886 CUX1P39880 1505 aa27.53■■■□□ 2
SLC38A6-202ENST00000354886 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
SLC38A6-202ENST00000354886 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
SLC38A6-202ENST00000354886 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.98
SLC38A6-202ENST00000354886 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
SLC38A6-202ENST00000354886 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
SLC38A6-202ENST00000354886 KIF21BO75037 1637 aa27.36■■□□□ 1.97
SLC38A6-202ENST00000354886 NESP48681 1621 aa27.33■■□□□ 1.97
SLC38A6-202ENST00000354886 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
SLC38A6-202ENST00000354886 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
SLC38A6-202ENST00000354886 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
SLC38A6-202ENST00000354886 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
SLC38A6-202ENST00000354886 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
SLC38A6-202ENST00000354886 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
SLC38A6-202ENST00000354886 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
SLC38A6-202ENST00000354886 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
SLC38A6-202ENST00000354886 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
SLC38A6-202ENST00000354886 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
SLC38A6-202ENST00000354886 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
SLC38A6-202ENST00000354886 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
SLC38A6-202ENST00000354886 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
SLC38A6-202ENST00000354886 PRXQ9BXM0 1461 aa27.08■■□□□ 1.93
SLC38A6-202ENST00000354886 RAPGEF2Q9Y4G8 1499 aa27.08■■□□□ 1.93
SLC38A6-202ENST00000354886 CUX2O14529 1486 aa27.06■■□□□ 1.92
SLC38A6-202ENST00000354886 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
SLC38A6-202ENST00000354886 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
SLC38A6-202ENST00000354886 ABCA10Q8WWZ4 1543 aa26.97■■□□□ 1.91
SLC38A6-202ENST00000354886 PCGF6Q9BYE7 350 aa26.93■■□□□ 1.9
SLC38A6-202ENST00000354886 TRIM26Q12899 539 aaPredicted RBP26.92■■□□□ 1.9
SLC38A6-202ENST00000354886 WDR97A6NE52 1622 aa26.91■■□□□ 1.9
SLC38A6-202ENST00000354886 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
SLC38A6-202ENST00000354886 IGF1RP08069 1367 aa26.89■■□□□ 1.89
SLC38A6-202ENST00000354886 CLIP1P30622 1438 aa26.87■■□□□ 1.89
SLC38A6-202ENST00000354886 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
SLC38A6-202ENST00000354886 CARMIL1Q5VZK9 1371 aa26.78■■□□□ 1.88
SLC38A6-202ENST00000354886 CUL7Q14999 1698 aa26.78■■□□□ 1.88
SLC38A6-202ENST00000354886 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
SLC38A6-202ENST00000354886 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
SLC38A6-202ENST00000354886 WDR62O43379 1518 aa26.7■■□□□ 1.86
SLC38A6-202ENST00000354886 VPS8Q8N3P4 1428 aa26.69■■□□□ 1.86
SLC38A6-202ENST00000354886 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
SLC38A6-202ENST00000354886 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
SLC38A6-202ENST00000354886 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
SLC38A6-202ENST00000354886 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
SLC38A6-202ENST00000354886 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
SLC38A6-202ENST00000354886 THOC2Q8NI27 1593 aaKnown RBP26.55■■□□□ 1.84
SLC38A6-202ENST00000354886 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
SLC38A6-202ENST00000354886 PPARGC1BQ86YN6 1023 aaKnown RBP26.55■■□□□ 1.84
SLC38A6-202ENST00000354886 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
SLC38A6-202ENST00000354886 CTTNBP2Q8WZ74 1663 aa26.54■■□□□ 1.84
SLC38A6-202ENST00000354886 ARHGAP35Q9NRY4 1499 aa26.51■■□□□ 1.84
SLC38A6-202ENST00000354886 APLP2Q06481 763 aa26.42■■□□□ 1.82
SLC38A6-202ENST00000354886 HRCP23327 699 aa26.42■■□□□ 1.82
SLC38A6-202ENST00000354886 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
SLC38A6-202ENST00000354886 AQRO60306 1485 aaKnown RBP eCLIP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms