RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 AEBP2Q6ZN18 517 aaPredicted RBP23.89■■□□□ 1.41
CAST-239ENST00000513666 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
CAST-239ENST00000513666 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
CAST-239ENST00000513666 ABCC9O60706 1549 aa21.31■■□□□ 1
CAST-239ENST00000513666 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
CAST-239ENST00000513666 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CAST-239ENST00000513666 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
CAST-239ENST00000513666 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
CAST-239ENST00000513666 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
CAST-239ENST00000513666 NACADO15069 1562 aa19.91■□□□□ 0.78
CAST-239ENST00000513666 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
CAST-239ENST00000513666 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
CAST-239ENST00000513666 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
CAST-239ENST00000513666 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
CAST-239ENST00000513666 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
CAST-239ENST00000513666 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
CAST-239ENST00000513666 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
CAST-239ENST00000513666 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
CAST-239ENST00000513666 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
CAST-239ENST00000513666 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
CAST-239ENST00000513666 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
CAST-239ENST00000513666 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
CAST-239ENST00000513666 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
CAST-239ENST00000513666 FOXD1Q16676 465 aa18.94■□□□□ 0.62
CAST-239ENST00000513666 CUX2O14529 1486 aa18.57■□□□□ 0.56
CAST-239ENST00000513666 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
CAST-239ENST00000513666 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
CAST-239ENST00000513666 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
CAST-239ENST00000513666 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
CAST-239ENST00000513666 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
CAST-239ENST00000513666 NESP48681 1621 aa18.2■□□□□ 0.5
CAST-239ENST00000513666 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
CAST-239ENST00000513666 SMARCA4P51532 1647 aa18.14■□□□□ 0.5
CAST-239ENST00000513666 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
CAST-239ENST00000513666 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
CAST-239ENST00000513666 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
CAST-239ENST00000513666 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
CAST-239ENST00000513666 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
CAST-239ENST00000513666 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
CAST-239ENST00000513666 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
CAST-239ENST00000513666 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
CAST-239ENST00000513666 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
CAST-239ENST00000513666 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
CAST-239ENST00000513666 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
CAST-239ENST00000513666 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
CAST-239ENST00000513666 WDR62O43379 1518 aa17.78■□□□□ 0.44
CAST-239ENST00000513666 ADRA2BP18089 450 aa17.74■□□□□ 0.43
CAST-239ENST00000513666 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
CAST-239ENST00000513666 MSH5O43196 834 aa17.67■□□□□ 0.42
CAST-239ENST00000513666 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
CAST-239ENST00000513666 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
CAST-239ENST00000513666 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
CAST-239ENST00000513666 WIZO95785 1651 aa17.59■□□□□ 0.41
CAST-239ENST00000513666 CFTRP13569 1480 aa17.51■□□□□ 0.39
CAST-239ENST00000513666 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
CAST-239ENST00000513666 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
CAST-239ENST00000513666 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
CAST-239ENST00000513666 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
CAST-239ENST00000513666 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
CAST-239ENST00000513666 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
CAST-239ENST00000513666 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
CAST-239ENST00000513666 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
CAST-239ENST00000513666 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
CAST-239ENST00000513666 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
CAST-239ENST00000513666 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
CAST-239ENST00000513666 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
CAST-239ENST00000513666 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
CAST-239ENST00000513666 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
CAST-239ENST00000513666 CHD1O14646 1710 aa17.17■□□□□ 0.34
CAST-239ENST00000513666 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
CAST-239ENST00000513666 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
CAST-239ENST00000513666 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
CAST-239ENST00000513666 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
CAST-239ENST00000513666 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
CAST-239ENST00000513666 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
CAST-239ENST00000513666 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■■□ 23
CAST-239ENST00000513666 FBLN2P98095 1184 aa17.05■□□□□ 0.32
CAST-239ENST00000513666 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
CAST-239ENST00000513666 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
CAST-239ENST00000513666 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
CAST-239ENST00000513666 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
CAST-239ENST00000513666 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
CAST-239ENST00000513666 SOGA1O94964 1423 aa16.92■□□□□ 0.3
CAST-239ENST00000513666 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
CAST-239ENST00000513666 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
CAST-239ENST00000513666 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
CAST-239ENST00000513666 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
CAST-239ENST00000513666 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
CAST-239ENST00000513666 GRIN2BQ13224 1484 aa16.83■□□□□ 0.29
CAST-239ENST00000513666 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
CAST-239ENST00000513666 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
CAST-239ENST00000513666 CUX1P39880 1505 aa16.77■□□□□ 0.28
CAST-239ENST00000513666 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
CAST-239ENST00000513666 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
CAST-239ENST00000513666 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
CAST-239ENST00000513666 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
CAST-239ENST00000513666 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
CAST-239ENST00000513666 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
CAST-239ENST00000513666 NUP160Q12769 1436 aa16.58■□□□□ 0.25
CAST-239ENST00000513666 SHROOM2Q13796 1616 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms