RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
CAST-209ENST00000437034 MYT1Q01538 1121 aa9.9□□□□□ -0.82
CAST-209ENST00000437034 AEBP2Q6ZN18 517 aaPredicted RBP9.83□□□□□ -0.84
CAST-209ENST00000437034 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
CAST-209ENST00000437034 TTBK1Q5TCY1 1321 aaPredicted RBP9.71□□□□□ -0.86
CAST-209ENST00000437034 DAXXQ9UER7 740 aaPredicted RBP9.67□□□□□ -0.86
CAST-209ENST00000437034 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
CAST-209ENST00000437034 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
CAST-209ENST00000437034 ERICH6Q7L0X2 663 aa9.57□□□□□ -0.88
CAST-209ENST00000437034 CHIC1Q5VXU3 224 aa9.52□□□□□ -0.89
CAST-209ENST00000437034 APLP2Q06481 763 aa9.48□□□□□ -0.89
CAST-209ENST00000437034 PLPPR3Q6T4P5 718 aa9.41□□□□□ -0.9
CAST-209ENST00000437034 RTN4Q9NQC3 1192 aaKnown RBP9.33□□□□□ -0.92
CAST-209ENST00000437034 NCBP3Q53F19 620 aaKnown RBP9.28□□□□□ -0.92
CAST-209ENST00000437034 NISCHQ9Y2I1 1504 aa9.27□□□□□ -0.93
CAST-209ENST00000437034 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
CAST-209ENST00000437034 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
CAST-209ENST00000437034 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
CAST-209ENST00000437034 ARXQ96QS3 562 aa8.98□□□□□ -0.97
CAST-209ENST00000437034 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
CAST-209ENST00000437034 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
CAST-209ENST00000437034 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
CAST-209ENST00000437034 BCL11AQ9H165 835 aa8.88□□□□□ -0.99
CAST-209ENST00000437034 PLEKHG5O94827 1062 aa8.87□□□□□ -0.99
CAST-209ENST00000437034 KCNA4P22459 653 aa8.81□□□□□ -1
CAST-209ENST00000437034 PODXL2Q9NZ53 605 aa8.77□□□□□ -1.01
CAST-209ENST00000437034 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
CAST-209ENST00000437034 TAOK2Q9UL54 1235 aa8.69□□□□□ -1.02
CAST-209ENST00000437034 FAM9AQ8IZU1 332 aaPredicted RBP8.67□□□□□ -1.02
CAST-209ENST00000437034 SENP3Q9H4L4 574 aaPredicted RBP8.65□□□□□ -1.02
CAST-209ENST00000437034 TPRNQ4KMQ1 711 aa8.63□□□□□ -1.03
CAST-209ENST00000437034 CSRNP3Q8WYN3 585 aa8.63□□□□□ -1.03
CAST-209ENST00000437034 CCDC180Q9P1Z9 1646 aa8.56□□□□□ -1.04
CAST-209ENST00000437034 NPM2Q86SE8 214 aaKnown RBP8.54□□□□□ -1.04
CAST-209ENST00000437034 C14orf37Q86TY3 774 aa8.51□□□□□ -1.05
CAST-209ENST00000437034 BCANQ96GW7 911 aa8.5□□□□□ -1.05
CAST-209ENST00000437034 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
CAST-209ENST00000437034 PDIA4P13667 645 aaKnown RBP8.43□□□□□ -1.06
CAST-209ENST00000437034 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
CAST-209ENST00000437034 UBE2Q2Q8WVN8 375 aa8.33□□□□□ -1.08
CAST-209ENST00000437034 PDE4CQ08493 712 aa8.33□□□□□ -1.08
CAST-209ENST00000437034 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
CAST-209ENST00000437034 PHF23Q9BUL5 403 aaPredicted RBP8.31□□□□□ -1.08
CAST-209ENST00000437034 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
CAST-209ENST00000437034 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
CAST-209ENST00000437034 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
CAST-209ENST00000437034 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
CAST-209ENST00000437034 PLCB2Q00722 1185 aa8.27□□□□□ -1.09
CAST-209ENST00000437034 NEFLP07196 543 aa8.26□□□□□ -1.09
CAST-209ENST00000437034 DHX37Q8IY37 1157 aaKnown RBP8.25□□□□□ -1.09
CAST-209ENST00000437034 CENPBP07199 599 aaPredicted RBP8.24□□□□□ -1.09
CAST-209ENST00000437034 FBXO3Q9UK99 471 aa8.24□□□□□ -1.09
CAST-209ENST00000437034 TMEM132AQ24JP5 1023 aa8.23□□□□□ -1.09
CAST-209ENST00000437034 DCAF8L2P0C7V8 631 aa8.21□□□□□ -1.1
CAST-209ENST00000437034 HRCP23327 699 aa8.21□□□□□ -1.1
CAST-209ENST00000437034 UBTFP17480 764 aaKnown RBP8.16□□□□□ -1.1
CAST-209ENST00000437034 CDK11BP21127 795 aaKnown RBP8.15□□□□□ -1.1
CAST-209ENST00000437034 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
CAST-209ENST00000437034 BCL11BQ9C0K0 894 aaPredicted RBP8.14□□□□□ -1.11
CAST-209ENST00000437034 TAF7LQ5H9L4 462 aa8.14□□□□□ -1.11
CAST-209ENST00000437034 SAMD1Q6SPF0 538 aaPredicted RBP8.14□□□□□ -1.11
CAST-209ENST00000437034 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
CAST-209ENST00000437034 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
CAST-209ENST00000437034 BRD2P25440 801 aaKnown RBP8.11□□□□□ -1.11
CAST-209ENST00000437034 DCAF1Q9Y4B6 1507 aa8.1□□□□□ -1.11
CAST-209ENST00000437034 MYO15BQ96JP2 1530 aa8.1□□□□□ -1.11
CAST-209ENST00000437034 SLC4A1APQ9BWU0 796 aaKnown RBP8.09□□□□□ -1.11
CAST-209ENST00000437034 POLR3GLQ9BT43 218 aa8.06□□□□□ -1.12
CAST-209ENST00000437034 CCDC136Q96JN2 1154 aa8.05□□□□□ -1.12
CAST-209ENST00000437034 CNKSR2Q8WXI2 1034 aa8.02□□□□□ -1.12
CAST-209ENST00000437034 CFAP44Q96MT7 982 aa8.02□□□□□ -1.13
CAST-209ENST00000437034 FGD1P98174 961 aa8.02□□□□□ -1.13
CAST-209ENST00000437034 A0A0U1RQG5 324 aaPredicted RBP7.99□□□□□ -1.13
CAST-209ENST00000437034 ZEB1P37275 1124 aaPredicted RBP7.99□□□□□ -1.13
CAST-209ENST00000437034 IGSF3O75054 1194 aa7.98□□□□□ -1.13
CAST-209ENST00000437034 PPP6R1Q9UPN7 881 aa7.97□□□□□ -1.13
CAST-209ENST00000437034 ANP32EQ9BTT0 268 aa7.96□□□□□ -1.14
CAST-209ENST00000437034 IRX6P78412 446 aaPredicted RBP7.95□□□□□ -1.14
CAST-209ENST00000437034 KDM2AQ9Y2K7 1162 aa7.94□□□□□ -1.14
CAST-209ENST00000437034 HSP90B1P14625 803 aaKnown RBP7.94□□□□□ -1.14
CAST-209ENST00000437034 PAXIP1Q6ZW49 1069 aaPredicted RBP7.94□□□□□ -1.14
CAST-209ENST00000437034 FBLN2P98095 1184 aa7.93□□□□□ -1.14
CAST-209ENST00000437034 VSIG10Q8N0Z9 540 aa7.91□□□□□ -1.14
CAST-209ENST00000437034 SHROOM4Q9ULL8 1493 aa7.91□□□□□ -1.14
CAST-209ENST00000437034 ZCCHC6Q5VYS8 1495 aaKnown RBP7.89□□□□□ -1.15
CAST-209ENST00000437034 NAP1L5Q96NT1 182 aaPredicted RBP7.86□□□□□ -1.15
CAST-209ENST00000437034 FOXD1Q16676 465 aa7.86□□□□□ -1.15
CAST-209ENST00000437034 HMGB1P09429 215 aaKnown RBP7.84□□□□□ -1.15
CAST-209ENST00000437034 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
CAST-209ENST00000437034 CCDC9Q9Y3X0 531 aaKnown RBP7.84□□□□□ -1.16
CAST-209ENST00000437034 ARID3AQ99856 593 aa7.83□□□□□ -1.16
CAST-209ENST00000437034 AAMPQ13685 434 aa7.82□□□□□ -1.16
CAST-209ENST00000437034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.82□□□□□ -1.16
CAST-209ENST00000437034 SALL2Q9Y467 1007 aaPredicted RBP7.82□□□□□ -1.16
CAST-209ENST00000437034 FKBP8Q14318 412 aa7.81□□□□□ -1.16
CAST-209ENST00000437034 CLSPNQ9HAW4 1339 aa7.81□□□□□ -1.16
CAST-209ENST00000437034 BCCIPQ9P287 314 aaKnown RBP eCLIP7.79□□□□□ -1.16
CAST-209ENST00000437034 RSPH4AQ5TD94 716 aa7.79□□□□□ -1.16
CAST-209ENST00000437034 ZBTB22O15209 634 aa7.77□□□□□ -1.16
CAST-209ENST00000437034 RBM10P98175 930 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms