Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PCDHB6Q9Y5E3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.82■■■□□ 2.68
PCDHB6Q9Y5E3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.81■■■□□ 2.68
PCDHB6Q9Y5E3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCDHB6Q9Y5E3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PCDHB6Q9Y5E3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.76■■■□□ 2.67
PCDHB6Q9Y5E3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHB6Q9Y5E3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHB6Q9Y5E3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCDHB6Q9Y5E3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCDHB6Q9Y5E3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCDHB6Q9Y5E3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.73■■■□□ 2.67
PCDHB6Q9Y5E3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.71■■■□□ 2.67
PCDHB6Q9Y5E3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PCDHB6Q9Y5E3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
PCDHB6Q9Y5E3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
PCDHB6Q9Y5E3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.67■■■□□ 2.66
PCDHB6Q9Y5E3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
PCDHB6Q9Y5E3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PCDHB6Q9Y5E3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
PCDHB6Q9Y5E3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.66■■■□□ 2.66
PCDHB6Q9Y5E3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
PCDHB6Q9Y5E3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
PCDHB6Q9Y5E3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
PCDHB6Q9Y5E3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PCDHB6Q9Y5E3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PCDHB6Q9Y5E3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PCDHB6Q9Y5E3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PCDHB6Q9Y5E3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PCDHB6Q9Y5E3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.62■■■□□ 2.65
PCDHB6Q9Y5E3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PCDHB6Q9Y5E3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.6■■■□□ 2.65
PCDHB6Q9Y5E3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.56■■■□□ 2.64
PCDHB6Q9Y5E3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHB6Q9Y5E3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.53■■■□□ 2.64
PCDHB6Q9Y5E3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.52■■■□□ 2.64
PCDHB6Q9Y5E3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCDHB6Q9Y5E3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
PCDHB6Q9Y5E3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.51■■■□□ 2.64
PCDHB6Q9Y5E3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PCDHB6Q9Y5E3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHB6Q9Y5E3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHB6Q9Y5E3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHB6Q9Y5E3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.49■■■□□ 2.63
PCDHB6Q9Y5E3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHB6Q9Y5E3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.49■■■□□ 2.63
PCDHB6Q9Y5E3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.48■■■□□ 2.63
PCDHB6Q9Y5E3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.48■■■□□ 2.63
PCDHB6Q9Y5E3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.47■■■□□ 2.63
PCDHB6Q9Y5E3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDHB6Q9Y5E3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDHB6Q9Y5E3 AC120057.4-201ENST00000624722 1615 ntBASIC31.46■■■□□ 2.63
PCDHB6Q9Y5E3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PCDHB6Q9Y5E3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.45■■■□□ 2.62
PCDHB6Q9Y5E3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.44■■■□□ 2.62
PCDHB6Q9Y5E3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PCDHB6Q9Y5E3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCDHB6Q9Y5E3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHB6Q9Y5E3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHB6Q9Y5E3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.4■■■□□ 2.62
PCDHB6Q9Y5E3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
PCDHB6Q9Y5E3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDHB6Q9Y5E3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.37■■■□□ 2.61
PCDHB6Q9Y5E3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.37■■■□□ 2.61
PCDHB6Q9Y5E3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.37■■■□□ 2.61
PCDHB6Q9Y5E3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PCDHB6Q9Y5E3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHB6Q9Y5E3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHB6Q9Y5E3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHB6Q9Y5E3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDHB6Q9Y5E3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDHB6Q9Y5E3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDHB6Q9Y5E3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PCDHB6Q9Y5E3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PCDHB6Q9Y5E3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHB6Q9Y5E3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHB6Q9Y5E3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.28■■■□□ 2.6
PCDHB6Q9Y5E3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHB6Q9Y5E3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHB6Q9Y5E3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHB6Q9Y5E3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHB6Q9Y5E3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHB6Q9Y5E3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHB6Q9Y5E3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.21■■■□□ 2.59
PCDHB6Q9Y5E3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PCDHB6Q9Y5E3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHB6Q9Y5E3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.19■■■□□ 2.58
PCDHB6Q9Y5E3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHB6Q9Y5E3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHB6Q9Y5E3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.17■■■□□ 2.58
PCDHB6Q9Y5E3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.15■■■□□ 2.58
PCDHB6Q9Y5E3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PCDHB6Q9Y5E3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
PCDHB6Q9Y5E3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
PCDHB6Q9Y5E3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PCDHB6Q9Y5E3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHB6Q9Y5E3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.12■■■□□ 2.57
PCDHB6Q9Y5E3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHB6Q9Y5E3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.1■■■□□ 2.57
PCDHB6Q9Y5E3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms