Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CHMP4BQ9H444 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CHMP4BQ9H444 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC35.1■■■■□ 3.21
CHMP4BQ9H444 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CHMP4BQ9H444 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
CHMP4BQ9H444 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CHMP4BQ9H444 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CHMP4BQ9H444 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC35.05■■■■□ 3.2
CHMP4BQ9H444 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CHMP4BQ9H444 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CHMP4BQ9H444 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CHMP4BQ9H444 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.02■■■■□ 3.2
CHMP4BQ9H444 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CHMP4BQ9H444 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.19
CHMP4BQ9H444 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.99■■■■□ 3.19
CHMP4BQ9H444 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC34.96■■■■□ 3.19
CHMP4BQ9H444 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
CHMP4BQ9H444 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CHMP4BQ9H444 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC34.93■■■■□ 3.18
CHMP4BQ9H444 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CHMP4BQ9H444 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.92■■■■□ 3.18
CHMP4BQ9H444 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
CHMP4BQ9H444 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
CHMP4BQ9H444 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.89■■■■□ 3.18
CHMP4BQ9H444 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CHMP4BQ9H444 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC34.88■■■■□ 3.17
CHMP4BQ9H444 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.88■■■■□ 3.17
CHMP4BQ9H444 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC34.87■■■■□ 3.17
CHMP4BQ9H444 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CHMP4BQ9H444 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CHMP4BQ9H444 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
CHMP4BQ9H444 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.85■■■■□ 3.17
CHMP4BQ9H444 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHMP4BQ9H444 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.83■■■■□ 3.17
CHMP4BQ9H444 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHMP4BQ9H444 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CHMP4BQ9H444 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHMP4BQ9H444 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CHMP4BQ9H444 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
CHMP4BQ9H444 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CHMP4BQ9H444 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
CHMP4BQ9H444 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CHMP4BQ9H444 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CHMP4BQ9H444 AC120057.4-201ENST00000624722 1615 ntBASIC34.77■■■■□ 3.16
CHMP4BQ9H444 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.16
CHMP4BQ9H444 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CHMP4BQ9H444 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CHMP4BQ9H444 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC34.75■■■■□ 3.15
CHMP4BQ9H444 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.74■■■■□ 3.15
CHMP4BQ9H444 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.74■■■■□ 3.15
CHMP4BQ9H444 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CHMP4BQ9H444 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CHMP4BQ9H444 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHMP4BQ9H444 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHMP4BQ9H444 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
CHMP4BQ9H444 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.67■■■■□ 3.14
CHMP4BQ9H444 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.67■■■■□ 3.14
CHMP4BQ9H444 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHMP4BQ9H444 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CHMP4BQ9H444 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC34.64■■■■□ 3.14
CHMP4BQ9H444 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.64■■■■□ 3.14
CHMP4BQ9H444 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CHMP4BQ9H444 ST7-205ENST00000393446 2114 ntTSL 5 BASIC34.63■■■■□ 3.13
CHMP4BQ9H444 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHMP4BQ9H444 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHMP4BQ9H444 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHMP4BQ9H444 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHMP4BQ9H444 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHMP4BQ9H444 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CHMP4BQ9H444 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC34.59■■■■□ 3.13
CHMP4BQ9H444 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.57■■■■□ 3.12
CHMP4BQ9H444 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.56■■■■□ 3.12
CHMP4BQ9H444 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
CHMP4BQ9H444 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
CHMP4BQ9H444 ST7-202ENST00000323984 2142 ntTSL 5 BASIC34.54■■■■□ 3.12
CHMP4BQ9H444 ST7-207ENST00000393449 2127 ntTSL 5 BASIC34.54■■■■□ 3.12
CHMP4BQ9H444 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHMP4BQ9H444 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.53■■■■□ 3.12
CHMP4BQ9H444 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CHMP4BQ9H444 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.5■■■■□ 3.11
CHMP4BQ9H444 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.48■■■■□ 3.11
CHMP4BQ9H444 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC34.45■■■■□ 3.11
CHMP4BQ9H444 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHMP4BQ9H444 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CHMP4BQ9H444 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CHMP4BQ9H444 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.41■■■■□ 3.1
CHMP4BQ9H444 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP4BQ9H444 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC34.38■■■■□ 3.09
CHMP4BQ9H444 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
CHMP4BQ9H444 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP4BQ9H444 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC34.36■■■■□ 3.09
CHMP4BQ9H444 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
CHMP4BQ9H444 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CHMP4BQ9H444 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CHMP4BQ9H444 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.29■■■■□ 3.08
CHMP4BQ9H444 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC34.29■■■■□ 3.08
CHMP4BQ9H444 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CHMP4BQ9H444 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC34.28■■■■□ 3.08
CHMP4BQ9H444 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CHMP4BQ9H444 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms