Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
TPRX1Q8N7U7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.19■■□□□ 1.3
TPRX1Q8N7U7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TPRX1Q8N7U7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TPRX1Q8N7U7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TPRX1Q8N7U7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.18■■□□□ 1.3
TPRX1Q8N7U7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TPRX1Q8N7U7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TPRX1Q8N7U7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.15■■□□□ 1.3
TPRX1Q8N7U7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TPRX1Q8N7U7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.15■■□□□ 1.3
TPRX1Q8N7U7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TPRX1Q8N7U7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.12■■□□□ 1.29
TPRX1Q8N7U7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TPRX1Q8N7U7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.11■■□□□ 1.29
TPRX1Q8N7U7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TPRX1Q8N7U7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TPRX1Q8N7U7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPRX1Q8N7U7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPRX1Q8N7U7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TPRX1Q8N7U7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TPRX1Q8N7U7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.08■■□□□ 1.29
TPRX1Q8N7U7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TPRX1Q8N7U7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TPRX1Q8N7U7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.07■■□□□ 1.28
TPRX1Q8N7U7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TPRX1Q8N7U7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TPRX1Q8N7U7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TPRX1Q8N7U7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TPRX1Q8N7U7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.05■■□□□ 1.28
TPRX1Q8N7U7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.04■■□□□ 1.28
TPRX1Q8N7U7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TPRX1Q8N7U7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TPRX1Q8N7U7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TPRX1Q8N7U7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TPRX1Q8N7U7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23■■□□□ 1.27
TPRX1Q8N7U7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23■■□□□ 1.27
TPRX1Q8N7U7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TPRX1Q8N7U7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
TPRX1Q8N7U7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.97■■□□□ 1.27
TPRX1Q8N7U7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.97■■□□□ 1.27
TPRX1Q8N7U7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
TPRX1Q8N7U7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TPRX1Q8N7U7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.95■■□□□ 1.26
TPRX1Q8N7U7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TPRX1Q8N7U7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TPRX1Q8N7U7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.92■■□□□ 1.26
TPRX1Q8N7U7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TPRX1Q8N7U7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPRX1Q8N7U7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TPRX1Q8N7U7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TPRX1Q8N7U7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.9■■□□□ 1.26
TPRX1Q8N7U7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.9■■□□□ 1.26
TPRX1Q8N7U7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.9■■□□□ 1.26
TPRX1Q8N7U7 AC120057.4-201ENST00000624722 1615 ntBASIC22.89■■□□□ 1.25
TPRX1Q8N7U7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TPRX1Q8N7U7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.88■■□□□ 1.25
TPRX1Q8N7U7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TPRX1Q8N7U7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TPRX1Q8N7U7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TPRX1Q8N7U7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TPRX1Q8N7U7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.87■■□□□ 1.25
TPRX1Q8N7U7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.87■■□□□ 1.25
TPRX1Q8N7U7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TPRX1Q8N7U7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TPRX1Q8N7U7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPRX1Q8N7U7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TPRX1Q8N7U7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TPRX1Q8N7U7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.84■■□□□ 1.25
TPRX1Q8N7U7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPRX1Q8N7U7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPRX1Q8N7U7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.82■■□□□ 1.24
TPRX1Q8N7U7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.82■■□□□ 1.24
TPRX1Q8N7U7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.82■■□□□ 1.24
TPRX1Q8N7U7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TPRX1Q8N7U7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.81■■□□□ 1.24
TPRX1Q8N7U7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TPRX1Q8N7U7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPRX1Q8N7U7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPRX1Q8N7U7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TPRX1Q8N7U7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TPRX1Q8N7U7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TPRX1Q8N7U7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TPRX1Q8N7U7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TPRX1Q8N7U7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.76■■□□□ 1.23
TPRX1Q8N7U7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TPRX1Q8N7U7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.75■■□□□ 1.23
TPRX1Q8N7U7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TPRX1Q8N7U7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.73■■□□□ 1.23
TPRX1Q8N7U7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TPRX1Q8N7U7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TPRX1Q8N7U7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TPRX1Q8N7U7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TPRX1Q8N7U7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
TPRX1Q8N7U7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TPRX1Q8N7U7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.7■■□□□ 1.22
TPRX1Q8N7U7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.69■■□□□ 1.22
TPRX1Q8N7U7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TPRX1Q8N7U7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TPRX1Q8N7U7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms