Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.52■■■□□ 2.16
ATPAF2Q8N5M1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.52■■■□□ 2.16
ATPAF2Q8N5M1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.51■■■□□ 2.15
ATPAF2Q8N5M1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ATPAF2Q8N5M1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
ATPAF2Q8N5M1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ATPAF2Q8N5M1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATPAF2Q8N5M1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ATPAF2Q8N5M1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.48■■■□□ 2.15
ATPAF2Q8N5M1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
ATPAF2Q8N5M1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ATPAF2Q8N5M1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ATPAF2Q8N5M1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ATPAF2Q8N5M1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ATPAF2Q8N5M1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.42■■■□□ 2.14
ATPAF2Q8N5M1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.42■■■□□ 2.14
ATPAF2Q8N5M1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.41■■■□□ 2.14
ATPAF2Q8N5M1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
ATPAF2Q8N5M1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
ATPAF2Q8N5M1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ATPAF2Q8N5M1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ATPAF2Q8N5M1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.37■■■□□ 2.13
ATPAF2Q8N5M1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.37■■■□□ 2.13
ATPAF2Q8N5M1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ATPAF2Q8N5M1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ATPAF2Q8N5M1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.36■■■□□ 2.13
ATPAF2Q8N5M1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.35■■■□□ 2.13
ATPAF2Q8N5M1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.34■■■□□ 2.13
ATPAF2Q8N5M1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATPAF2Q8N5M1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.31■■■□□ 2.12
ATPAF2Q8N5M1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ATPAF2Q8N5M1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.3■■■□□ 2.12
ATPAF2Q8N5M1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.3■■■□□ 2.12
ATPAF2Q8N5M1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.3■■■□□ 2.12
ATPAF2Q8N5M1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.26■■■□□ 2.11
ATPAF2Q8N5M1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.24■■■□□ 2.11
ATPAF2Q8N5M1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
ATPAF2Q8N5M1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATPAF2Q8N5M1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.21■■■□□ 2.11
ATPAF2Q8N5M1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.21■■■□□ 2.11
ATPAF2Q8N5M1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ATPAF2Q8N5M1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ATPAF2Q8N5M1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ATPAF2Q8N5M1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATPAF2Q8N5M1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.18■■■□□ 2.1
ATPAF2Q8N5M1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.18■■■□□ 2.1
ATPAF2Q8N5M1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.17■■■□□ 2.1
ATPAF2Q8N5M1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ATPAF2Q8N5M1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATPAF2Q8N5M1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ATPAF2Q8N5M1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATPAF2Q8N5M1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATPAF2Q8N5M1 AC120057.4-201ENST00000624722 1615 ntBASIC28.14■■■□□ 2.1
ATPAF2Q8N5M1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ATPAF2Q8N5M1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATPAF2Q8N5M1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ATPAF2Q8N5M1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATPAF2Q8N5M1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.12■■■□□ 2.09
ATPAF2Q8N5M1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATPAF2Q8N5M1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATPAF2Q8N5M1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
ATPAF2Q8N5M1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ATPAF2Q8N5M1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.1■■■□□ 2.09
ATPAF2Q8N5M1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATPAF2Q8N5M1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATPAF2Q8N5M1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATPAF2Q8N5M1 RARRES2P7-201ENST00000567349 469 ntBASIC28.08■■■□□ 2.09
ATPAF2Q8N5M1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATPAF2Q8N5M1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ATPAF2Q8N5M1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATPAF2Q8N5M1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATPAF2Q8N5M1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.03■■■□□ 2.08
ATPAF2Q8N5M1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ATPAF2Q8N5M1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
ATPAF2Q8N5M1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ATPAF2Q8N5M1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
ATPAF2Q8N5M1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
ATPAF2Q8N5M1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28■■■□□ 2.07
ATPAF2Q8N5M1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
ATPAF2Q8N5M1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
ATPAF2Q8N5M1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
ATPAF2Q8N5M1 SETD8P1-201ENST00000623146 1180 ntBASIC27.94■■■□□ 2.06
ATPAF2Q8N5M1 AL133380.1-201ENST00000506013 324 ntBASIC27.93■■■□□ 2.06
ATPAF2Q8N5M1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.92■■■□□ 2.06
ATPAF2Q8N5M1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
ATPAF2Q8N5M1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
ATPAF2Q8N5M1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.92■■■□□ 2.06
ATPAF2Q8N5M1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
ATPAF2Q8N5M1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ATPAF2Q8N5M1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ATPAF2Q8N5M1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
ATPAF2Q8N5M1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.89■■■□□ 2.06
ATPAF2Q8N5M1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ATPAF2Q8N5M1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ATPAF2Q8N5M1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ATPAF2Q8N5M1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.85■■■□□ 2.05
ATPAF2Q8N5M1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.85■■■□□ 2.05
ATPAF2Q8N5M1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
ATPAF2Q8N5M1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ATPAF2Q8N5M1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms