Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZNF561Q8N587 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
ZNF561Q8N587 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.43■■□□□ 1.34
ZNF561Q8N587 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF561Q8N587 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.4■■□□□ 1.34
ZNF561Q8N587 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ZNF561Q8N587 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.39■■□□□ 1.33
ZNF561Q8N587 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
ZNF561Q8N587 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF561Q8N587 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZNF561Q8N587 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
ZNF561Q8N587 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF561Q8N587 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZNF561Q8N587 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.34■■□□□ 1.33
ZNF561Q8N587 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
ZNF561Q8N587 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZNF561Q8N587 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF561Q8N587 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZNF561Q8N587 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.32■■□□□ 1.32
ZNF561Q8N587 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZNF561Q8N587 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.29■■□□□ 1.32
ZNF561Q8N587 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF561Q8N587 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF561Q8N587 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.27■■□□□ 1.32
ZNF561Q8N587 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.27■■□□□ 1.32
ZNF561Q8N587 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF561Q8N587 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF561Q8N587 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
ZNF561Q8N587 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
ZNF561Q8N587 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF561Q8N587 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF561Q8N587 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZNF561Q8N587 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF561Q8N587 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
ZNF561Q8N587 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.2■■□□□ 1.3
ZNF561Q8N587 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF561Q8N587 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF561Q8N587 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.19■■□□□ 1.3
ZNF561Q8N587 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZNF561Q8N587 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.19■■□□□ 1.3
ZNF561Q8N587 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.19■■□□□ 1.3
ZNF561Q8N587 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF561Q8N587 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF561Q8N587 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF561Q8N587 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF561Q8N587 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF561Q8N587 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF561Q8N587 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.16■■□□□ 1.3
ZNF561Q8N587 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF561Q8N587 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF561Q8N587 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF561Q8N587 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF561Q8N587 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF561Q8N587 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF561Q8N587 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.1■■□□□ 1.29
ZNF561Q8N587 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ZNF561Q8N587 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF561Q8N587 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.08■■□□□ 1.29
ZNF561Q8N587 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ZNF561Q8N587 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZNF561Q8N587 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZNF561Q8N587 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.07■■□□□ 1.28
ZNF561Q8N587 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.07■■□□□ 1.28
ZNF561Q8N587 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.05■■□□□ 1.28
ZNF561Q8N587 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.05■■□□□ 1.28
ZNF561Q8N587 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
ZNF561Q8N587 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF561Q8N587 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZNF561Q8N587 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZNF561Q8N587 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZNF561Q8N587 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
ZNF561Q8N587 AC139426.1-201ENST00000568218 2529 ntBASIC22.98■■□□□ 1.27
ZNF561Q8N587 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.97■■□□□ 1.27
ZNF561Q8N587 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZNF561Q8N587 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF561Q8N587 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF561Q8N587 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.96■■□□□ 1.27
ZNF561Q8N587 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZNF561Q8N587 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.95■■□□□ 1.26
ZNF561Q8N587 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.95■■□□□ 1.26
ZNF561Q8N587 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.95■■□□□ 1.26
ZNF561Q8N587 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF561Q8N587 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF561Q8N587 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ZNF561Q8N587 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.93■■□□□ 1.26
ZNF561Q8N587 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF561Q8N587 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.93■■□□□ 1.26
ZNF561Q8N587 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ZNF561Q8N587 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF561Q8N587 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ZNF561Q8N587 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZNF561Q8N587 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ZNF561Q8N587 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
ZNF561Q8N587 AC120057.4-201ENST00000624722 1615 ntBASIC22.9■■□□□ 1.26
ZNF561Q8N587 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZNF561Q8N587 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
ZNF561Q8N587 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.89■■□□□ 1.25
ZNF561Q8N587 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
ZNF561Q8N587 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.88■■□□□ 1.25
ZNF561Q8N587 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms