Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RSPO1Q2MKA7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.3■■□□□ 1.48
RSPO1Q2MKA7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RSPO1Q2MKA7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO1Q2MKA7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RSPO1Q2MKA7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RSPO1Q2MKA7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RSPO1Q2MKA7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.27■■□□□ 1.48
RSPO1Q2MKA7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
RSPO1Q2MKA7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
RSPO1Q2MKA7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RSPO1Q2MKA7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RSPO1Q2MKA7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.22■■□□□ 1.47
RSPO1Q2MKA7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.22■■□□□ 1.47
RSPO1Q2MKA7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
RSPO1Q2MKA7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
RSPO1Q2MKA7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RSPO1Q2MKA7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RSPO1Q2MKA7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RSPO1Q2MKA7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RSPO1Q2MKA7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RSPO1Q2MKA7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RSPO1Q2MKA7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RSPO1Q2MKA7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RSPO1Q2MKA7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.12■■□□□ 1.45
RSPO1Q2MKA7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.11■■□□□ 1.45
RSPO1Q2MKA7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.11■■□□□ 1.45
RSPO1Q2MKA7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RSPO1Q2MKA7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RSPO1Q2MKA7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RSPO1Q2MKA7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RSPO1Q2MKA7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.09■■□□□ 1.45
RSPO1Q2MKA7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RSPO1Q2MKA7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.08■■□□□ 1.45
RSPO1Q2MKA7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
RSPO1Q2MKA7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RSPO1Q2MKA7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
RSPO1Q2MKA7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RSPO1Q2MKA7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RSPO1Q2MKA7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.07■■□□□ 1.44
RSPO1Q2MKA7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RSPO1Q2MKA7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RSPO1Q2MKA7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.06■■□□□ 1.44
RSPO1Q2MKA7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.06■■□□□ 1.44
RSPO1Q2MKA7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RSPO1Q2MKA7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
RSPO1Q2MKA7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.04■■□□□ 1.44
RSPO1Q2MKA7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.04■■□□□ 1.44
RSPO1Q2MKA7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.04■■□□□ 1.44
RSPO1Q2MKA7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.04■■□□□ 1.44
RSPO1Q2MKA7 AC120057.4-201ENST00000624722 1615 ntBASIC24.02■■□□□ 1.44
RSPO1Q2MKA7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RSPO1Q2MKA7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RSPO1Q2MKA7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24■■□□□ 1.43
RSPO1Q2MKA7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
RSPO1Q2MKA7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RSPO1Q2MKA7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RSPO1Q2MKA7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.99■■□□□ 1.43
RSPO1Q2MKA7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.99■■□□□ 1.43
RSPO1Q2MKA7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RSPO1Q2MKA7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RSPO1Q2MKA7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RSPO1Q2MKA7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RSPO1Q2MKA7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RSPO1Q2MKA7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.95■■□□□ 1.42
RSPO1Q2MKA7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.95■■□□□ 1.42
RSPO1Q2MKA7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.95■■□□□ 1.42
RSPO1Q2MKA7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RSPO1Q2MKA7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RSPO1Q2MKA7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RSPO1Q2MKA7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RSPO1Q2MKA7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RSPO1Q2MKA7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.91■■□□□ 1.42
RSPO1Q2MKA7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RSPO1Q2MKA7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPO1Q2MKA7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.87■■□□□ 1.41
RSPO1Q2MKA7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPO1Q2MKA7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RSPO1Q2MKA7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RSPO1Q2MKA7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.85■■□□□ 1.41
RSPO1Q2MKA7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RSPO1Q2MKA7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RSPO1Q2MKA7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RSPO1Q2MKA7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO1Q2MKA7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RSPO1Q2MKA7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RSPO1Q2MKA7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RSPO1Q2MKA7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RSPO1Q2MKA7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RSPO1Q2MKA7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPO1Q2MKA7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RSPO1Q2MKA7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RSPO1Q2MKA7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RSPO1Q2MKA7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RSPO1Q2MKA7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.75■■□□□ 1.39
RSPO1Q2MKA7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RSPO1Q2MKA7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.74■■□□□ 1.39
RSPO1Q2MKA7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO1Q2MKA7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.73■■□□□ 1.39
RSPO1Q2MKA7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms