Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
RSPO1Q2MKA7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RSPO1Q2MKA7 AL356512.1-201ENST00000607453 1739 ntBASIC28.97■■■□□ 2.23
RSPO1Q2MKA7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
RSPO1Q2MKA7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.68■■■□□ 2.18
RSPO1Q2MKA7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RSPO1Q2MKA7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.57■■■□□ 2.16
RSPO1Q2MKA7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RSPO1Q2MKA7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.47■■■□□ 2.15
RSPO1Q2MKA7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.14■■■□□ 2.1
RSPO1Q2MKA7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
RSPO1Q2MKA7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.03■■■□□ 2.08
RSPO1Q2MKA7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
RSPO1Q2MKA7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RSPO1Q2MKA7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
RSPO1Q2MKA7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.43■■□□□ 1.98
RSPO1Q2MKA7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RSPO1Q2MKA7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.37■■□□□ 1.97
RSPO1Q2MKA7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.34■■□□□ 1.97
RSPO1Q2MKA7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RSPO1Q2MKA7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.26■■□□□ 1.95
RSPO1Q2MKA7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
RSPO1Q2MKA7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
RSPO1Q2MKA7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RSPO1Q2MKA7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RSPO1Q2MKA7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.01■■□□□ 1.91
RSPO1Q2MKA7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RSPO1Q2MKA7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RSPO1Q2MKA7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RSPO1Q2MKA7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.88
RSPO1Q2MKA7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RSPO1Q2MKA7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RSPO1Q2MKA7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.73■■□□□ 1.87
RSPO1Q2MKA7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.68■■□□□ 1.86
RSPO1Q2MKA7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
RSPO1Q2MKA7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RSPO1Q2MKA7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.61■■□□□ 1.85
RSPO1Q2MKA7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RSPO1Q2MKA7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RSPO1Q2MKA7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RSPO1Q2MKA7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.43■■□□□ 1.82
RSPO1Q2MKA7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RSPO1Q2MKA7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.25■■□□□ 1.79
RSPO1Q2MKA7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RSPO1Q2MKA7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.2■■□□□ 1.78
RSPO1Q2MKA7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RSPO1Q2MKA7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RSPO1Q2MKA7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RSPO1Q2MKA7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RSPO1Q2MKA7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RSPO1Q2MKA7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RSPO1Q2MKA7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RSPO1Q2MKA7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RSPO1Q2MKA7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.05■■□□□ 1.76
RSPO1Q2MKA7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
RSPO1Q2MKA7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26■■□□□ 1.75
RSPO1Q2MKA7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.99■■□□□ 1.75
RSPO1Q2MKA7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RSPO1Q2MKA7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RSPO1Q2MKA7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.95■■□□□ 1.74
RSPO1Q2MKA7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RSPO1Q2MKA7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RSPO1Q2MKA7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RSPO1Q2MKA7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.81■■□□□ 1.72
RSPO1Q2MKA7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
RSPO1Q2MKA7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RSPO1Q2MKA7 AC015813.7-201ENST00000623294 581 ntBASIC25.77■■□□□ 1.72
RSPO1Q2MKA7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RSPO1Q2MKA7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RSPO1Q2MKA7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RSPO1Q2MKA7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RSPO1Q2MKA7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RSPO1Q2MKA7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RSPO1Q2MKA7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RSPO1Q2MKA7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.54■■□□□ 1.68
RSPO1Q2MKA7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.68
RSPO1Q2MKA7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RSPO1Q2MKA7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RSPO1Q2MKA7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.47■■□□□ 1.67
RSPO1Q2MKA7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RSPO1Q2MKA7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RSPO1Q2MKA7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
RSPO1Q2MKA7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPO1Q2MKA7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RSPO1Q2MKA7 AC145285.7-201ENST00000614819 1539 ntBASIC25.33■■□□□ 1.65
RSPO1Q2MKA7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.33■■□□□ 1.65
RSPO1Q2MKA7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RSPO1Q2MKA7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RSPO1Q2MKA7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.26■■□□□ 1.63
RSPO1Q2MKA7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RSPO1Q2MKA7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RSPO1Q2MKA7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RSPO1Q2MKA7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RSPO1Q2MKA7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.21■■□□□ 1.63
RSPO1Q2MKA7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
RSPO1Q2MKA7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
RSPO1Q2MKA7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
RSPO1Q2MKA7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RSPO1Q2MKA7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
RSPO1Q2MKA7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms