Protein–RNA interactions for Protein: P62318

SNRPD3, Small nuclear ribonucleoprotein Sm D3, humanhuman

Known RBP Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3P62318 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SNRPD3P62318 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNRPD3P62318 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.92■□□□□ 0.94
SNRPD3P62318 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
SNRPD3P62318 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNRPD3P62318 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNRPD3P62318 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SNRPD3P62318 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SNRPD3P62318 AL031258.1-201ENST00000623562 325 ntBASIC20.86■□□□□ 0.93
SNRPD3P62318 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.86■□□□□ 0.93
SNRPD3P62318 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRPD3P62318 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPD3P62318 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNRPD3P62318 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRPD3P62318 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRPD3P62318 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNRPD3P62318 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRPD3P62318 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SNRPD3P62318 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNRPD3P62318 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SNRPD3P62318 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRPD3P62318 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.8■□□□□ 0.92
SNRPD3P62318 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRPD3P62318 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPD3P62318 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SNRPD3P62318 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPD3P62318 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SNRPD3P62318 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPD3P62318 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPD3P62318 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.75■□□□□ 0.91
SNRPD3P62318 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPD3P62318 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.75■□□□□ 0.91
SNRPD3P62318 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRPD3P62318 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRPD3P62318 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.74■□□□□ 0.91
SNRPD3P62318 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRPD3P62318 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNRPD3P62318 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.72■□□□□ 0.91
SNRPD3P62318 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.72■□□□□ 0.91
SNRPD3P62318 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SNRPD3P62318 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPD3P62318 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRPD3P62318 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPD3P62318 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.66■□□□□ 0.9
SNRPD3P62318 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPD3P62318 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRPD3P62318 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SNRPD3P62318 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPD3P62318 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.65■□□□□ 0.9
SNRPD3P62318 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.65■□□□□ 0.9
SNRPD3P62318 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.65■□□□□ 0.9
SNRPD3P62318 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPD3P62318 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNRPD3P62318 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNRPD3P62318 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPD3P62318 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPD3P62318 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNRPD3P62318 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPD3P62318 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPD3P62318 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNRPD3P62318 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPD3P62318 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPD3P62318 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SNRPD3P62318 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.6■□□□□ 0.89
SNRPD3P62318 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPD3P62318 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPD3P62318 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRPD3P62318 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRPD3P62318 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPD3P62318 AC120057.4-201ENST00000624722 1615 ntBASIC20.56■□□□□ 0.88
SNRPD3P62318 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPD3P62318 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.56■□□□□ 0.88
SNRPD3P62318 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPD3P62318 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.55■□□□□ 0.88
SNRPD3P62318 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.54■□□□□ 0.88
SNRPD3P62318 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPD3P62318 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPD3P62318 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPD3P62318 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPD3P62318 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPD3P62318 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPD3P62318 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SNRPD3P62318 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRPD3P62318 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNRPD3P62318 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNRPD3P62318 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.5■□□□□ 0.87
SNRPD3P62318 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRPD3P62318 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPD3P62318 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPD3P62318 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNRPD3P62318 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SNRPD3P62318 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.46■□□□□ 0.87
SNRPD3P62318 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPD3P62318 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRPD3P62318 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPD3P62318 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.43■□□□□ 0.86
SNRPD3P62318 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRPD3P62318 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.42■□□□□ 0.86
SNRPD3P62318 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPD3P62318 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms