Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRCC2O43543 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.05■■□□□ 1.44
XRCC2O43543 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
XRCC2O43543 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRCC2O43543 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
XRCC2O43543 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
XRCC2O43543 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
XRCC2O43543 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
XRCC2O43543 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.02■■□□□ 1.44
XRCC2O43543 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRCC2O43543 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRCC2O43543 AL031258.1-201ENST00000623562 325 ntBASIC24.01■■□□□ 1.43
XRCC2O43543 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
XRCC2O43543 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
XRCC2O43543 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
XRCC2O43543 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
XRCC2O43543 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.98■■□□□ 1.43
XRCC2O43543 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.97■■□□□ 1.43
XRCC2O43543 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
XRCC2O43543 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
XRCC2O43543 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
XRCC2O43543 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.94■■□□□ 1.42
XRCC2O43543 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.94■■□□□ 1.42
XRCC2O43543 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
XRCC2O43543 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
XRCC2O43543 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
XRCC2O43543 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
XRCC2O43543 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
XRCC2O43543 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
XRCC2O43543 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.9■■□□□ 1.42
XRCC2O43543 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
XRCC2O43543 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.87■■□□□ 1.41
XRCC2O43543 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.87■■□□□ 1.41
XRCC2O43543 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.87■■□□□ 1.41
XRCC2O43543 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.86■■□□□ 1.41
XRCC2O43543 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.86■■□□□ 1.41
XRCC2O43543 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
XRCC2O43543 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRCC2O43543 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRCC2O43543 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRCC2O43543 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.84■■□□□ 1.41
XRCC2O43543 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
XRCC2O43543 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
XRCC2O43543 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC2O43543 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC2O43543 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.83■■□□□ 1.41
XRCC2O43543 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC2O43543 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC2O43543 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC2O43543 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC2O43543 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
XRCC2O43543 AC120057.4-201ENST00000624722 1615 ntBASIC23.81■■□□□ 1.4
XRCC2O43543 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRCC2O43543 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
XRCC2O43543 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRCC2O43543 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRCC2O43543 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRCC2O43543 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.79■■□□□ 1.4
XRCC2O43543 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.78■■□□□ 1.4
XRCC2O43543 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRCC2O43543 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.76■■□□□ 1.39
XRCC2O43543 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
XRCC2O43543 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
XRCC2O43543 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
XRCC2O43543 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
XRCC2O43543 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.72■■□□□ 1.39
XRCC2O43543 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.72■■□□□ 1.39
XRCC2O43543 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
XRCC2O43543 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
XRCC2O43543 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.7■■□□□ 1.38
XRCC2O43543 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
XRCC2O43543 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
XRCC2O43543 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
XRCC2O43543 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
XRCC2O43543 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.68■■□□□ 1.38
XRCC2O43543 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.68■■□□□ 1.38
XRCC2O43543 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
XRCC2O43543 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
XRCC2O43543 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
XRCC2O43543 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
XRCC2O43543 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
XRCC2O43543 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.63■■□□□ 1.37
XRCC2O43543 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.63■■□□□ 1.37
XRCC2O43543 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.62■■□□□ 1.37
XRCC2O43543 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
XRCC2O43543 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.61■■□□□ 1.37
XRCC2O43543 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
XRCC2O43543 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
XRCC2O43543 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
XRCC2O43543 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
XRCC2O43543 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.58■■□□□ 1.37
XRCC2O43543 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
XRCC2O43543 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
XRCC2O43543 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.56■■□□□ 1.36
XRCC2O43543 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
XRCC2O43543 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
XRCC2O43543 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
XRCC2O43543 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
XRCC2O43543 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.53■■□□□ 1.36
XRCC2O43543 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms