Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CD40P25942 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CD40P25942 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 RPL3P2-204ENST00000413027 1203 ntBASIC12.07□□□□□ -0.48
CD40P25942 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.07□□□□□ -0.48
CD40P25942 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.07□□□□□ -0.48
CD40P25942 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.07□□□□□ -0.48
CD40P25942 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 AL009176.1-201ENST00000607876 650 ntBASIC12.07□□□□□ -0.48
CD40P25942 AC027601.5-201ENST00000624065 2482 ntBASIC12.07□□□□□ -0.48
CD40P25942 AL139424.3-202ENST00000641619 917 ntBASIC12.07□□□□□ -0.48
CD40P25942 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.07□□□□□ -0.48
CD40P25942 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.07□□□□□ -0.48
CD40P25942 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.07□□□□□ -0.48
CD40P25942 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.07□□□□□ -0.48
CD40P25942 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD40P25942 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CD40P25942 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CD40P25942 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CD40P25942 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 MIR1307-201ENST00000408840 149 ntBASIC12.06□□□□□ -0.48
CD40P25942 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.06□□□□□ -0.48
CD40P25942 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.06□□□□□ -0.48
CD40P25942 RPL35P9-201ENST00000446059 350 ntBASIC12.06□□□□□ -0.48
CD40P25942 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.06□□□□□ -0.48
CD40P25942 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.06□□□□□ -0.48
CD40P25942 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 RN7SL23P-201ENST00000484055 275 ntBASIC12.06□□□□□ -0.48
CD40P25942 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.06□□□□□ -0.48
CD40P25942 IGHV1-12-201ENST00000518307 205 ntBASIC12.06□□□□□ -0.48
CD40P25942 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.06□□□□□ -0.48
CD40P25942 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 AC226150.1-201ENST00000544259 466 ntBASIC12.06□□□□□ -0.48
CD40P25942 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.06□□□□□ -0.48
CD40P25942 AC132872.1-201ENST00000566986 1195 ntBASIC12.06□□□□□ -0.48
CD40P25942 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 AL049840.2-201ENST00000602722 535 ntBASIC12.06□□□□□ -0.48
CD40P25942 AC012073.1-201ENST00000606114 1108 ntBASIC12.06□□□□□ -0.48
CD40P25942 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 AL132780.4-201ENST00000624870 1135 ntBASIC12.06□□□□□ -0.48
CD40P25942 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.06□□□□□ -0.48
CD40P25942 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CD40P25942 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CD40P25942 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD40P25942 AC015909.5-201ENST00000624336 2266 ntBASIC12.06□□□□□ -0.48
CD40P25942 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CD40P25942 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms