RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
ITGAM-202ENST00000544665 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
ITGAM-202ENST00000544665 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
ITGAM-202ENST00000544665 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
ITGAM-202ENST00000544665 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
ITGAM-202ENST00000544665 FAM9AQ8IZU1 332 aaPredicted RBP22.77■■□□□ 1.24
ITGAM-202ENST00000544665 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
ITGAM-202ENST00000544665 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
ITGAM-202ENST00000544665 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
ITGAM-202ENST00000544665 APLP2Q06481 763 aa22.36■■□□□ 1.17
ITGAM-202ENST00000544665 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
ITGAM-202ENST00000544665 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
ITGAM-202ENST00000544665 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
ITGAM-202ENST00000544665 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
ITGAM-202ENST00000544665 UBTFP17480 764 aaKnown RBP21.94■■□□□ 1.1
ITGAM-202ENST00000544665 PPARGC1BQ86YN6 1023 aaKnown RBP21.9■■□□□ 1.1
ITGAM-202ENST00000544665 LOC105371045A0A1W2PR82 267 aa21.9■■□□□ 1.1
ITGAM-202ENST00000544665 PELP1Q8IZL8 1130 aaKnown RBP21.88■■□□□ 1.09
ITGAM-202ENST00000544665 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
ITGAM-202ENST00000544665 HRCP23327 699 aa21.79■■□□□ 1.08
ITGAM-202ENST00000544665 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
ITGAM-202ENST00000544665 ATP1B4Q9UN42 357 aaPredicted RBP21.67■■□□□ 1.06
ITGAM-202ENST00000544665 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
ITGAM-202ENST00000544665 ABCC9O60706 1549 aa21.27■■□□□ 1
ITGAM-202ENST00000544665 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■□□□□ 0.99
ITGAM-202ENST00000544665 ITGAEP38570 1179 aa21.23■□□□□ 0.99
ITGAM-202ENST00000544665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
ITGAM-202ENST00000544665 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
ITGAM-202ENST00000544665 NEFLP07196 543 aa21.05■□□□□ 0.96
ITGAM-202ENST00000544665 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
ITGAM-202ENST00000544665 ZCCHC6Q5VYS8 1495 aaKnown RBP20.98■□□□□ 0.95
ITGAM-202ENST00000544665 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
ITGAM-202ENST00000544665 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
ITGAM-202ENST00000544665 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
ITGAM-202ENST00000544665 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
ITGAM-202ENST00000544665 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
ITGAM-202ENST00000544665 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
ITGAM-202ENST00000544665 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
ITGAM-202ENST00000544665 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
ITGAM-202ENST00000544665 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
ITGAM-202ENST00000544665 MYT1Q01538 1121 aa20.56■□□□□ 0.88
ITGAM-202ENST00000544665 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
ITGAM-202ENST00000544665 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
ITGAM-202ENST00000544665 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
ITGAM-202ENST00000544665 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
ITGAM-202ENST00000544665 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
ITGAM-202ENST00000544665 P3H3Q8IVL6 736 aa20.41■□□□□ 0.86
ITGAM-202ENST00000544665 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
ITGAM-202ENST00000544665 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
ITGAM-202ENST00000544665 BCANQ96GW7 911 aa20.29■□□□□ 0.84
ITGAM-202ENST00000544665 ANP32CO43423 234 aa20.24■□□□□ 0.83
ITGAM-202ENST00000544665 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
ITGAM-202ENST00000544665 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
ITGAM-202ENST00000544665 FBLN2P98095 1184 aa20.17■□□□□ 0.82
ITGAM-202ENST00000544665 DAXXQ9UER7 740 aaPredicted RBP20.15■□□□□ 0.82
ITGAM-202ENST00000544665 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
ITGAM-202ENST00000544665 CLIP1P30622 1438 aa20.01■□□□□ 0.79
ITGAM-202ENST00000544665 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
ITGAM-202ENST00000544665 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
ITGAM-202ENST00000544665 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
ITGAM-202ENST00000544665 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
ITGAM-202ENST00000544665 TONSLQ96HA7 1378 aa19.92■□□□□ 0.78
ITGAM-202ENST00000544665 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
ITGAM-202ENST00000544665 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
ITGAM-202ENST00000544665 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
ITGAM-202ENST00000544665 CLSPNQ9HAW4 1339 aa19.9■□□□□ 0.78
ITGAM-202ENST00000544665 MIER1Q8N108 512 aa19.89■□□□□ 0.78
ITGAM-202ENST00000544665 NACADO15069 1562 aa19.89■□□□□ 0.77
ITGAM-202ENST00000544665 EEA1Q15075 1411 aa19.89■□□□□ 0.77
ITGAM-202ENST00000544665 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
ITGAM-202ENST00000544665 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
ITGAM-202ENST00000544665 RTL5Q5HYW3 569 aaPredicted RBP19.86■□□□□ 0.77
ITGAM-202ENST00000544665 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
ITGAM-202ENST00000544665 FKBP8Q14318 412 aa19.82■□□□□ 0.76
ITGAM-202ENST00000544665 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
ITGAM-202ENST00000544665 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
ITGAM-202ENST00000544665 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
ITGAM-202ENST00000544665 MTUS2Q5JR59 1369 aa19.74■□□□□ 0.75
ITGAM-202ENST00000544665 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
ITGAM-202ENST00000544665 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
ITGAM-202ENST00000544665 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
ITGAM-202ENST00000544665 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
ITGAM-202ENST00000544665 SOGA1O94964 1423 aa19.67■□□□□ 0.74
ITGAM-202ENST00000544665 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
ITGAM-202ENST00000544665 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
ITGAM-202ENST00000544665 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
ITGAM-202ENST00000544665 CANXP27824 592 aaKnown RBP19.56■□□□□ 0.72
ITGAM-202ENST00000544665 SALL2Q9Y467 1007 aaPredicted RBP19.54■□□□□ 0.72
ITGAM-202ENST00000544665 MRS2Q9HD23 443 aa19.53■□□□□ 0.72
ITGAM-202ENST00000544665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.71
ITGAM-202ENST00000544665 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
ITGAM-202ENST00000544665 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
ITGAM-202ENST00000544665 ANP32AP39687 249 aaKnown RBP19.5■□□□□ 0.71
ITGAM-202ENST00000544665 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
ITGAM-202ENST00000544665 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
ITGAM-202ENST00000544665 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
ITGAM-202ENST00000544665 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
ITGAM-202ENST00000544665 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
ITGAM-202ENST00000544665 EIF4G2P78344 907 aaKnown RBP eCLIP19.48■□□□□ 0.713e-8■■■■■ 46
ITGAM-202ENST00000544665 IRX6P78412 446 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms