RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
PCNA-202ENST00000379160 AEBP2Q6ZN18 517 aaPredicted RBP33.51■■■□□ 2.96
PCNA-202ENST00000379160 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
PCNA-202ENST00000379160 ABCC9O60706 1549 aa30.77■■■□□ 2.52
PCNA-202ENST00000379160 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
PCNA-202ENST00000379160 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
PCNA-202ENST00000379160 NACADO15069 1562 aa29.05■■■□□ 2.24
PCNA-202ENST00000379160 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
PCNA-202ENST00000379160 DNAJC5BQ9UF47 199 aa28.83■■■□□ 2.21
PCNA-202ENST00000379160 PHF23Q9BUL5 403 aaPredicted RBP28.8■■■□□ 2.2
PCNA-202ENST00000379160 SENP3Q9H4L4 574 aaPredicted RBP28.75■■■□□ 2.19
PCNA-202ENST00000379160 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
PCNA-202ENST00000379160 UNC13AQ9UPW8 1703 aa28.64■■■□□ 2.17
PCNA-202ENST00000379160 MYO15BQ96JP2 1530 aa28.62■■■□□ 2.17
PCNA-202ENST00000379160 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
PCNA-202ENST00000379160 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
PCNA-202ENST00000379160 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
PCNA-202ENST00000379160 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
PCNA-202ENST00000379160 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
PCNA-202ENST00000379160 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
PCNA-202ENST00000379160 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
PCNA-202ENST00000379160 CECR2Q9BXF3 1484 aa27.69■■■□□ 2.02
PCNA-202ENST00000379160 PLPPR3Q6T4P5 718 aa26.88■■□□□ 1.89
PCNA-202ENST00000379160 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
PCNA-202ENST00000379160 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
PCNA-202ENST00000379160 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
PCNA-202ENST00000379160 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
PCNA-202ENST00000379160 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
PCNA-202ENST00000379160 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
PCNA-202ENST00000379160 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
PCNA-202ENST00000379160 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
PCNA-202ENST00000379160 FOXD1Q16676 465 aa26.46■■□□□ 1.83
PCNA-202ENST00000379160 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.83
PCNA-202ENST00000379160 CUX2O14529 1486 aa26.44■■□□□ 1.82
PCNA-202ENST00000379160 NESP48681 1621 aa26.44■■□□□ 1.82
PCNA-202ENST00000379160 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
PCNA-202ENST00000379160 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
PCNA-202ENST00000379160 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
PCNA-202ENST00000379160 WIZO95785 1651 aa26.14■■□□□ 1.78
PCNA-202ENST00000379160 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
PCNA-202ENST00000379160 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
PCNA-202ENST00000379160 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
PCNA-202ENST00000379160 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
PCNA-202ENST00000379160 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
PCNA-202ENST00000379160 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
PCNA-202ENST00000379160 WDR62O43379 1518 aa25.78■■□□□ 1.72
PCNA-202ENST00000379160 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
PCNA-202ENST00000379160 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
PCNA-202ENST00000379160 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
PCNA-202ENST00000379160 CFTRP13569 1480 aa25.72■■□□□ 1.71
PCNA-202ENST00000379160 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
PCNA-202ENST00000379160 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
PCNA-202ENST00000379160 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
PCNA-202ENST00000379160 ADRA2BP18089 450 aa25.35■■□□□ 1.65
PCNA-202ENST00000379160 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
PCNA-202ENST00000379160 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
PCNA-202ENST00000379160 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
PCNA-202ENST00000379160 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
PCNA-202ENST00000379160 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
PCNA-202ENST00000379160 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
PCNA-202ENST00000379160 ABCC8Q09428 1581 aa25.17■■□□□ 1.62
PCNA-202ENST00000379160 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
PCNA-202ENST00000379160 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
PCNA-202ENST00000379160 PIAS4Q8N2W9 510 aaPredicted RBP25.04■■□□□ 1.6
PCNA-202ENST00000379160 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
PCNA-202ENST00000379160 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.591e-7■■■■■ 32.1
PCNA-202ENST00000379160 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
PCNA-202ENST00000379160 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
PCNA-202ENST00000379160 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
PCNA-202ENST00000379160 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
PCNA-202ENST00000379160 RAD54L2Q9Y4B4 1467 aa24.94■■□□□ 1.58
PCNA-202ENST00000379160 CHD1O14646 1710 aa24.9■■□□□ 1.58
PCNA-202ENST00000379160 SOGA1O94964 1423 aa24.9■■□□□ 1.58
PCNA-202ENST00000379160 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
PCNA-202ENST00000379160 FBLN2P98095 1184 aa24.87■■□□□ 1.57
PCNA-202ENST00000379160 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
PCNA-202ENST00000379160 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
PCNA-202ENST00000379160 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
PCNA-202ENST00000379160 CUX1P39880 1505 aa24.84■■□□□ 1.57
PCNA-202ENST00000379160 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
PCNA-202ENST00000379160 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
PCNA-202ENST00000379160 CYB5RLQ6IPT4 315 aa24.72■■□□□ 1.55
PCNA-202ENST00000379160 MSH5O43196 834 aa24.67■■□□□ 1.54
PCNA-202ENST00000379160 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
PCNA-202ENST00000379160 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
PCNA-202ENST00000379160 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.53
PCNA-202ENST00000379160 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
PCNA-202ENST00000379160 GAPVD1Q14C86 1478 aa24.59■■□□□ 1.53
PCNA-202ENST00000379160 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
PCNA-202ENST00000379160 SYNJ1O43426 1573 aa24.58■■□□□ 1.52
PCNA-202ENST00000379160 CLASP1Q7Z460 1538 aa24.58■■□□□ 1.52
PCNA-202ENST00000379160 SYNJ2O15056 1496 aa24.58■■□□□ 1.52
PCNA-202ENST00000379160 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
PCNA-202ENST00000379160 ABCA5Q8WWZ7 1642 aa24.52■■□□□ 1.52
PCNA-202ENST00000379160 WRNQ14191 1432 aaPredicted RBP eCLIP24.48■■□□□ 1.51
PCNA-202ENST00000379160 TRHP20396 242 aaPredicted RBP24.45■■□□□ 1.5
PCNA-202ENST00000379160 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
PCNA-202ENST00000379160 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
PCNA-202ENST00000379160 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
PCNA-202ENST00000379160 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms