RNA–Protein interactions for RNA: ENST00000303143.9

COL8A2-201, Transcript of collagen type VIII alpha 2 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A2, Length 4,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2-201ENST00000303143 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
COL8A2-201ENST00000303143 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
COL8A2-201ENST00000303143 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
COL8A2-201ENST00000303143 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
COL8A2-201ENST00000303143 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
COL8A2-201ENST00000303143 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
COL8A2-201ENST00000303143 ABCC9O60706 1549 aa23.37■■□□□ 1.33
COL8A2-201ENST00000303143 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
COL8A2-201ENST00000303143 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
COL8A2-201ENST00000303143 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
COL8A2-201ENST00000303143 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
COL8A2-201ENST00000303143 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
COL8A2-201ENST00000303143 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
COL8A2-201ENST00000303143 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
COL8A2-201ENST00000303143 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
COL8A2-201ENST00000303143 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
COL8A2-201ENST00000303143 NACADO15069 1562 aa22.45■■□□□ 1.18
COL8A2-201ENST00000303143 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
COL8A2-201ENST00000303143 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
COL8A2-201ENST00000303143 UBTFP17480 764 aaKnown RBP22.3■■□□□ 1.16
COL8A2-201ENST00000303143 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
COL8A2-201ENST00000303143 APLP2Q06481 763 aa22.25■■□□□ 1.15
COL8A2-201ENST00000303143 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
COL8A2-201ENST00000303143 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
COL8A2-201ENST00000303143 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
COL8A2-201ENST00000303143 PPARGC1BQ86YN6 1023 aaKnown RBP22.11■■□□□ 1.13
COL8A2-201ENST00000303143 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
COL8A2-201ENST00000303143 HRCP23327 699 aa22.05■■□□□ 1.12
COL8A2-201ENST00000303143 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
COL8A2-201ENST00000303143 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
COL8A2-201ENST00000303143 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
COL8A2-201ENST00000303143 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
COL8A2-201ENST00000303143 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
COL8A2-201ENST00000303143 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
COL8A2-201ENST00000303143 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
COL8A2-201ENST00000303143 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
COL8A2-201ENST00000303143 WIZO95785 1651 aa21.6■■□□□ 1.05
COL8A2-201ENST00000303143 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
COL8A2-201ENST00000303143 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
COL8A2-201ENST00000303143 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
COL8A2-201ENST00000303143 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.03
COL8A2-201ENST00000303143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
COL8A2-201ENST00000303143 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
COL8A2-201ENST00000303143 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
COL8A2-201ENST00000303143 SMARCA4P51532 1647 aa21.39■■□□□ 1.02
COL8A2-201ENST00000303143 EEA1Q15075 1411 aa21.32■■□□□ 1
COL8A2-201ENST00000303143 ITGAEP38570 1179 aa21.31■■□□□ 1
COL8A2-201ENST00000303143 ABCC8Q09428 1581 aa21.29■■□□□ 1
COL8A2-201ENST00000303143 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
COL8A2-201ENST00000303143 SOGA1O94964 1423 aa21.22■□□□□ 0.99
COL8A2-201ENST00000303143 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
COL8A2-201ENST00000303143 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
COL8A2-201ENST00000303143 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
COL8A2-201ENST00000303143 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
COL8A2-201ENST00000303143 CLIP1P30622 1438 aa21.11■□□□□ 0.97
COL8A2-201ENST00000303143 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
COL8A2-201ENST00000303143 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
COL8A2-201ENST00000303143 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
COL8A2-201ENST00000303143 NEFLP07196 543 aa21.01■□□□□ 0.95
COL8A2-201ENST00000303143 FAM50AQ14320 339 aaKnown RBP21.01■□□□□ 0.95
COL8A2-201ENST00000303143 KIF27Q86VH2 1401 aa21■□□□□ 0.95
COL8A2-201ENST00000303143 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
COL8A2-201ENST00000303143 MYT1Q01538 1121 aa20.95■□□□□ 0.94
COL8A2-201ENST00000303143 BICRAQ9NZM4 1560 aa20.94■□□□□ 0.94
COL8A2-201ENST00000303143 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
COL8A2-201ENST00000303143 FBLN2P98095 1184 aa20.84■□□□□ 0.93
COL8A2-201ENST00000303143 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
COL8A2-201ENST00000303143 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
COL8A2-201ENST00000303143 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
COL8A2-201ENST00000303143 CUX2O14529 1486 aa20.8■□□□□ 0.92
COL8A2-201ENST00000303143 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
COL8A2-201ENST00000303143 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
COL8A2-201ENST00000303143 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
COL8A2-201ENST00000303143 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
COL8A2-201ENST00000303143 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
COL8A2-201ENST00000303143 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
COL8A2-201ENST00000303143 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
COL8A2-201ENST00000303143 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
COL8A2-201ENST00000303143 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
COL8A2-201ENST00000303143 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
COL8A2-201ENST00000303143 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
COL8A2-201ENST00000303143 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
COL8A2-201ENST00000303143 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
COL8A2-201ENST00000303143 MTUS2Q5JR59 1369 aa20.54■□□□□ 0.88
COL8A2-201ENST00000303143 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
COL8A2-201ENST00000303143 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
COL8A2-201ENST00000303143 CFTRP13569 1480 aa20.52■□□□□ 0.88
COL8A2-201ENST00000303143 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
COL8A2-201ENST00000303143 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
COL8A2-201ENST00000303143 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
COL8A2-201ENST00000303143 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
COL8A2-201ENST00000303143 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
COL8A2-201ENST00000303143 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
COL8A2-201ENST00000303143 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
COL8A2-201ENST00000303143 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
COL8A2-201ENST00000303143 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
COL8A2-201ENST00000303143 CC2D2AQ9P2K1 1620 aa20.4■□□□□ 0.86
COL8A2-201ENST00000303143 TOP2BQ02880 1626 aa20.39■□□□□ 0.85
COL8A2-201ENST00000303143 IGF1RP08069 1367 aa20.39■□□□□ 0.85
COL8A2-201ENST00000303143 MYT1LQ9UL68 1186 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms