RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
PCDHB16-201ENST00000609684 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
PCDHB16-201ENST00000609684 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
PCDHB16-201ENST00000609684 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
PCDHB16-201ENST00000609684 EHMT2Q96KQ7 1210 aa22.97■■□□□ 1.27
PCDHB16-201ENST00000609684 FAM9AQ8IZU1 332 aaPredicted RBP22.51■■□□□ 1.19
PCDHB16-201ENST00000609684 APLP2Q06481 763 aa22.37■■□□□ 1.17
PCDHB16-201ENST00000609684 PCGF6Q9BYE7 350 aa22.31■■□□□ 1.16
PCDHB16-201ENST00000609684 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
PCDHB16-201ENST00000609684 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
PCDHB16-201ENST00000609684 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
PCDHB16-201ENST00000609684 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
PCDHB16-201ENST00000609684 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
PCDHB16-201ENST00000609684 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
PCDHB16-201ENST00000609684 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
PCDHB16-201ENST00000609684 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.06
PCDHB16-201ENST00000609684 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
PCDHB16-201ENST00000609684 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
PCDHB16-201ENST00000609684 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
PCDHB16-201ENST00000609684 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
PCDHB16-201ENST00000609684 LOC105371045A0A1W2PR82 267 aa21.4■■□□□ 1.02
PCDHB16-201ENST00000609684 HRCP23327 699 aa21.23■□□□□ 0.99
PCDHB16-201ENST00000609684 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
PCDHB16-201ENST00000609684 ITGAEP38570 1179 aa21.06■□□□□ 0.96
PCDHB16-201ENST00000609684 ABCC9O60706 1549 aa21.03■□□□□ 0.96
PCDHB16-201ENST00000609684 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
PCDHB16-201ENST00000609684 ERICH6Q7L0X2 663 aa21■□□□□ 0.95
PCDHB16-201ENST00000609684 NEFLP07196 543 aa20.99■□□□□ 0.95
PCDHB16-201ENST00000609684 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.94
PCDHB16-201ENST00000609684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
PCDHB16-201ENST00000609684 POLR3GLQ9BT43 218 aa20.68■□□□□ 0.9
PCDHB16-201ENST00000609684 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
PCDHB16-201ENST00000609684 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
PCDHB16-201ENST00000609684 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
PCDHB16-201ENST00000609684 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
PCDHB16-201ENST00000609684 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
PCDHB16-201ENST00000609684 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
PCDHB16-201ENST00000609684 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
PCDHB16-201ENST00000609684 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
PCDHB16-201ENST00000609684 SCRIBQ14160 1630 aa20.33■□□□□ 0.85
PCDHB16-201ENST00000609684 MYT1Q01538 1121 aa20.33■□□□□ 0.85
PCDHB16-201ENST00000609684 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
PCDHB16-201ENST00000609684 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
PCDHB16-201ENST00000609684 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
PCDHB16-201ENST00000609684 FBLN2P98095 1184 aa20.16■□□□□ 0.82
PCDHB16-201ENST00000609684 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
PCDHB16-201ENST00000609684 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.81
PCDHB16-201ENST00000609684 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
PCDHB16-201ENST00000609684 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
PCDHB16-201ENST00000609684 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
PCDHB16-201ENST00000609684 ANP32CO43423 234 aa20.07■□□□□ 0.8
PCDHB16-201ENST00000609684 DCAF1Q9Y4B6 1507 aa20.05■□□□□ 0.8
PCDHB16-201ENST00000609684 BCANQ96GW7 911 aa20.01■□□□□ 0.79
PCDHB16-201ENST00000609684 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
PCDHB16-201ENST00000609684 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
PCDHB16-201ENST00000609684 ACIN1Q9UKV3 1341 aaKnown RBP19.87■□□□□ 0.77
PCDHB16-201ENST00000609684 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
PCDHB16-201ENST00000609684 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
PCDHB16-201ENST00000609684 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
PCDHB16-201ENST00000609684 RTL5Q5HYW3 569 aaPredicted RBP19.79■□□□□ 0.76
PCDHB16-201ENST00000609684 TONSLQ96HA7 1378 aa19.73■□□□□ 0.75
PCDHB16-201ENST00000609684 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
PCDHB16-201ENST00000609684 CLIP1P30622 1438 aa19.68■□□□□ 0.74
PCDHB16-201ENST00000609684 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
PCDHB16-201ENST00000609684 CHIC2Q9UKJ5 165 aa19.63■□□□□ 0.73
PCDHB16-201ENST00000609684 CEP162Q5TB80 1403 aa19.58■□□□□ 0.72
PCDHB16-201ENST00000609684 NACADO15069 1562 aa19.57■□□□□ 0.72
PCDHB16-201ENST00000609684 EEA1Q15075 1411 aa19.57■□□□□ 0.72
PCDHB16-201ENST00000609684 CANXP27824 592 aaKnown RBP19.56■□□□□ 0.72
PCDHB16-201ENST00000609684 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
PCDHB16-201ENST00000609684 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
PCDHB16-201ENST00000609684 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
PCDHB16-201ENST00000609684 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.71
PCDHB16-201ENST00000609684 FKBP8Q14318 412 aa19.51■□□□□ 0.71
PCDHB16-201ENST00000609684 ZBTB47Q9UFB7 747 aaPredicted RBP19.48■□□□□ 0.71
PCDHB16-201ENST00000609684 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
PCDHB16-201ENST00000609684 NEFMP07197 916 aa19.47■□□□□ 0.71
PCDHB16-201ENST00000609684 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
PCDHB16-201ENST00000609684 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
PCDHB16-201ENST00000609684 MIER1Q8N108 512 aa19.43■□□□□ 0.7
PCDHB16-201ENST00000609684 BCL11AQ9H165 835 aa19.43■□□□□ 0.7
PCDHB16-201ENST00000609684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
PCDHB16-201ENST00000609684 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
PCDHB16-201ENST00000609684 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
PCDHB16-201ENST00000609684 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
PCDHB16-201ENST00000609684 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
PCDHB16-201ENST00000609684 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
PCDHB16-201ENST00000609684 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
PCDHB16-201ENST00000609684 HIRIP3Q9BW71 556 aaPredicted RBP19.4■□□□□ 0.7
PCDHB16-201ENST00000609684 RRP7BPQ9NSQ0 103 aa19.37■□□□□ 0.69
PCDHB16-201ENST00000609684 ANP32AP39687 249 aaKnown RBP19.37■□□□□ 0.69
PCDHB16-201ENST00000609684 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
PCDHB16-201ENST00000609684 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCDHB16-201ENST00000609684 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
PCDHB16-201ENST00000609684 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
PCDHB16-201ENST00000609684 KDM2AQ9Y2K7 1162 aa19.35■□□□□ 0.69
PCDHB16-201ENST00000609684 SALL2Q9Y467 1007 aaPredicted RBP19.35■□□□□ 0.69
PCDHB16-201ENST00000609684 TMC1Q8TDI8 760 aa19.33■□□□□ 0.68
PCDHB16-201ENST00000609684 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
PCDHB16-201ENST00000609684 ESF1Q9H501 851 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms