RNA–Protein interactions for RNA: ENST00000518307.1

IGHV1-12-201, Transcript of immunoglobulin heavy variable 1-12 (pseudogene), humanhuman

BASIC

Gene IGHV1-12, Length 205 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-12-201ENST00000518307 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
IGHV1-12-201ENST00000518307 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
IGHV1-12-201ENST00000518307 ABCC9O60706 1549 aa29.32■■■□□ 2.28
IGHV1-12-201ENST00000518307 NACADO15069 1562 aa28.26■■■□□ 2.11
IGHV1-12-201ENST00000518307 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
IGHV1-12-201ENST00000518307 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
IGHV1-12-201ENST00000518307 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
IGHV1-12-201ENST00000518307 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
IGHV1-12-201ENST00000518307 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
IGHV1-12-201ENST00000518307 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
IGHV1-12-201ENST00000518307 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
IGHV1-12-201ENST00000518307 SCRIBQ14160 1630 aa27.42■■□□□ 1.98
IGHV1-12-201ENST00000518307 PABPN1Q86U42 306 aaKnown RBP eCLIP27.34■■□□□ 1.97
IGHV1-12-201ENST00000518307 SHROOM4Q9ULL8 1493 aa27.18■■□□□ 1.94
IGHV1-12-201ENST00000518307 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
IGHV1-12-201ENST00000518307 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
IGHV1-12-201ENST00000518307 CC2D2AQ9P2K1 1620 aa26.58■■□□□ 1.85
IGHV1-12-201ENST00000518307 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
IGHV1-12-201ENST00000518307 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
IGHV1-12-201ENST00000518307 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.79
IGHV1-12-201ENST00000518307 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
IGHV1-12-201ENST00000518307 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
IGHV1-12-201ENST00000518307 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
IGHV1-12-201ENST00000518307 PEG3Q9GZU2 1588 aa26.06■■□□□ 1.76
IGHV1-12-201ENST00000518307 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
IGHV1-12-201ENST00000518307 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
IGHV1-12-201ENST00000518307 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
IGHV1-12-201ENST00000518307 WIZO95785 1651 aa25.8■■□□□ 1.72
IGHV1-12-201ENST00000518307 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
IGHV1-12-201ENST00000518307 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
IGHV1-12-201ENST00000518307 NESP48681 1621 aa25.42■■□□□ 1.66
IGHV1-12-201ENST00000518307 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
IGHV1-12-201ENST00000518307 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
IGHV1-12-201ENST00000518307 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
IGHV1-12-201ENST00000518307 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
IGHV1-12-201ENST00000518307 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
IGHV1-12-201ENST00000518307 CFTRP13569 1480 aa25.17■■□□□ 1.62
IGHV1-12-201ENST00000518307 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
IGHV1-12-201ENST00000518307 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
IGHV1-12-201ENST00000518307 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
IGHV1-12-201ENST00000518307 CUX2O14529 1486 aa25.02■■□□□ 1.6
IGHV1-12-201ENST00000518307 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
IGHV1-12-201ENST00000518307 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
IGHV1-12-201ENST00000518307 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
IGHV1-12-201ENST00000518307 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
IGHV1-12-201ENST00000518307 WDR62O43379 1518 aa24.89■■□□□ 1.57
IGHV1-12-201ENST00000518307 URB2Q14146 1524 aaKnown RBP24.78■■□□□ 1.56
IGHV1-12-201ENST00000518307 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
IGHV1-12-201ENST00000518307 DNMBPQ6XZF7 1577 aa24.61■■□□□ 1.53
IGHV1-12-201ENST00000518307 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
IGHV1-12-201ENST00000518307 CUX1P39880 1505 aa24.47■■□□□ 1.51
IGHV1-12-201ENST00000518307 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
IGHV1-12-201ENST00000518307 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
IGHV1-12-201ENST00000518307 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
IGHV1-12-201ENST00000518307 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
IGHV1-12-201ENST00000518307 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
IGHV1-12-201ENST00000518307 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
IGHV1-12-201ENST00000518307 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
IGHV1-12-201ENST00000518307 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
IGHV1-12-201ENST00000518307 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
IGHV1-12-201ENST00000518307 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
IGHV1-12-201ENST00000518307 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
IGHV1-12-201ENST00000518307 WDR97A6NE52 1622 aa24.25■■□□□ 1.47
IGHV1-12-201ENST00000518307 SOGA1O94964 1423 aa24.25■■□□□ 1.47
IGHV1-12-201ENST00000518307 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.46
IGHV1-12-201ENST00000518307 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
IGHV1-12-201ENST00000518307 ABCA10Q8WWZ4 1543 aa24.14■■□□□ 1.45
IGHV1-12-201ENST00000518307 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
IGHV1-12-201ENST00000518307 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
IGHV1-12-201ENST00000518307 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
IGHV1-12-201ENST00000518307 GRIN2BQ13224 1484 aa24■■□□□ 1.43
IGHV1-12-201ENST00000518307 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
IGHV1-12-201ENST00000518307 CHD1O14646 1710 aa23.98■■□□□ 1.43
IGHV1-12-201ENST00000518307 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
IGHV1-12-201ENST00000518307 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
IGHV1-12-201ENST00000518307 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
IGHV1-12-201ENST00000518307 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
IGHV1-12-201ENST00000518307 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
IGHV1-12-201ENST00000518307 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
IGHV1-12-201ENST00000518307 FBLN2P98095 1184 aa23.74■■□□□ 1.39
IGHV1-12-201ENST00000518307 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
IGHV1-12-201ENST00000518307 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
IGHV1-12-201ENST00000518307 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
IGHV1-12-201ENST00000518307 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
IGHV1-12-201ENST00000518307 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
IGHV1-12-201ENST00000518307 IGF1RP08069 1367 aa23.65■■□□□ 1.38
IGHV1-12-201ENST00000518307 CUL7Q14999 1698 aa23.65■■□□□ 1.38
IGHV1-12-201ENST00000518307 NUP160Q12769 1436 aa23.63■■□□□ 1.37
IGHV1-12-201ENST00000518307 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
IGHV1-12-201ENST00000518307 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
IGHV1-12-201ENST00000518307 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
IGHV1-12-201ENST00000518307 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
IGHV1-12-201ENST00000518307 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
IGHV1-12-201ENST00000518307 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
IGHV1-12-201ENST00000518307 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.36
IGHV1-12-201ENST00000518307 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
IGHV1-12-201ENST00000518307 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
IGHV1-12-201ENST00000518307 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
IGHV1-12-201ENST00000518307 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
IGHV1-12-201ENST00000518307 ERCC6L2Q5T890 1561 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms