RNA–Protein interactions for RNA: ENST00000390361.3

TRBV7-3-201, Transcript of T cell receptor beta variable 7-3, humanhuman

APPRIS P1 BASIC

Gene TRBV7-3, Length 397 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-3-201ENST00000390361 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.89
TRBV7-3-201ENST00000390361 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
TRBV7-3-201ENST00000390361 ABCC9O60706 1549 aa28.5■■■□□ 2.15
TRBV7-3-201ENST00000390361 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
TRBV7-3-201ENST00000390361 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
TRBV7-3-201ENST00000390361 NACADO15069 1562 aa27.56■■■□□ 2
TRBV7-3-201ENST00000390361 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
TRBV7-3-201ENST00000390361 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
TRBV7-3-201ENST00000390361 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
TRBV7-3-201ENST00000390361 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
TRBV7-3-201ENST00000390361 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
TRBV7-3-201ENST00000390361 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
TRBV7-3-201ENST00000390361 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
TRBV7-3-201ENST00000390361 SHROOM4Q9ULL8 1493 aa26.47■■□□□ 1.83
TRBV7-3-201ENST00000390361 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
TRBV7-3-201ENST00000390361 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
TRBV7-3-201ENST00000390361 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
TRBV7-3-201ENST00000390361 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
TRBV7-3-201ENST00000390361 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
TRBV7-3-201ENST00000390361 SMARCA4P51532 1647 aa25.62■■□□□ 1.69
TRBV7-3-201ENST00000390361 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
TRBV7-3-201ENST00000390361 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
TRBV7-3-201ENST00000390361 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
TRBV7-3-201ENST00000390361 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
TRBV7-3-201ENST00000390361 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
TRBV7-3-201ENST00000390361 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
TRBV7-3-201ENST00000390361 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
TRBV7-3-201ENST00000390361 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
TRBV7-3-201ENST00000390361 WIZO95785 1651 aa25.2■■□□□ 1.62
TRBV7-3-201ENST00000390361 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
TRBV7-3-201ENST00000390361 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
TRBV7-3-201ENST00000390361 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
TRBV7-3-201ENST00000390361 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
TRBV7-3-201ENST00000390361 NESP48681 1621 aa24.69■■□□□ 1.54
TRBV7-3-201ENST00000390361 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
TRBV7-3-201ENST00000390361 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
TRBV7-3-201ENST00000390361 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
TRBV7-3-201ENST00000390361 CFTRP13569 1480 aa24.58■■□□□ 1.52
TRBV7-3-201ENST00000390361 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
TRBV7-3-201ENST00000390361 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
TRBV7-3-201ENST00000390361 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
TRBV7-3-201ENST00000390361 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
TRBV7-3-201ENST00000390361 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
TRBV7-3-201ENST00000390361 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
TRBV7-3-201ENST00000390361 CUX2O14529 1486 aa24.28■■□□□ 1.48
TRBV7-3-201ENST00000390361 WDR62O43379 1518 aa24.18■■□□□ 1.46
TRBV7-3-201ENST00000390361 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
TRBV7-3-201ENST00000390361 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
TRBV7-3-201ENST00000390361 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
TRBV7-3-201ENST00000390361 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
TRBV7-3-201ENST00000390361 CUX1P39880 1505 aa23.89■■□□□ 1.41
TRBV7-3-201ENST00000390361 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
TRBV7-3-201ENST00000390361 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
TRBV7-3-201ENST00000390361 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
TRBV7-3-201ENST00000390361 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
TRBV7-3-201ENST00000390361 SOGA1O94964 1423 aa23.76■■□□□ 1.39
TRBV7-3-201ENST00000390361 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
TRBV7-3-201ENST00000390361 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
TRBV7-3-201ENST00000390361 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
TRBV7-3-201ENST00000390361 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
TRBV7-3-201ENST00000390361 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
TRBV7-3-201ENST00000390361 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
TRBV7-3-201ENST00000390361 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
TRBV7-3-201ENST00000390361 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
TRBV7-3-201ENST00000390361 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
TRBV7-3-201ENST00000390361 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.37
TRBV7-3-201ENST00000390361 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
TRBV7-3-201ENST00000390361 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
TRBV7-3-201ENST00000390361 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
TRBV7-3-201ENST00000390361 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
TRBV7-3-201ENST00000390361 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
TRBV7-3-201ENST00000390361 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
TRBV7-3-201ENST00000390361 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
TRBV7-3-201ENST00000390361 SNAPC4Q5SXM2 1469 aa23.37■■□□□ 1.33
TRBV7-3-201ENST00000390361 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
TRBV7-3-201ENST00000390361 OSCARQ8IYS5 282 aa23.34■■□□□ 1.33
TRBV7-3-201ENST00000390361 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
TRBV7-3-201ENST00000390361 FBLN2P98095 1184 aa23.32■■□□□ 1.32
TRBV7-3-201ENST00000390361 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
TRBV7-3-201ENST00000390361 DNAJC5Q9H3Z4 198 aa23.3■■□□□ 1.32
TRBV7-3-201ENST00000390361 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
TRBV7-3-201ENST00000390361 CHD1O14646 1710 aa23.25■■□□□ 1.31
TRBV7-3-201ENST00000390361 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
TRBV7-3-201ENST00000390361 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
TRBV7-3-201ENST00000390361 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
TRBV7-3-201ENST00000390361 IGF1RP08069 1367 aa23.21■■□□□ 1.31
TRBV7-3-201ENST00000390361 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
TRBV7-3-201ENST00000390361 CUL7Q14999 1698 aa23.15■■□□□ 1.3
TRBV7-3-201ENST00000390361 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
TRBV7-3-201ENST00000390361 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
TRBV7-3-201ENST00000390361 EEA1Q15075 1411 aa23.07■■□□□ 1.28
TRBV7-3-201ENST00000390361 NUP160Q12769 1436 aa23.03■■□□□ 1.28
TRBV7-3-201ENST00000390361 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
TRBV7-3-201ENST00000390361 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
TRBV7-3-201ENST00000390361 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
TRBV7-3-201ENST00000390361 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
TRBV7-3-201ENST00000390361 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
TRBV7-3-201ENST00000390361 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
TRBV7-3-201ENST00000390361 ARHGEF11O15085 1522 aa22.89■■□□□ 1.26
TRBV7-3-201ENST00000390361 KIAA0586Q9BVV6 1533 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms