RNA–Protein interactions for RNA: ENST00000610583.1

PCDHGA6-202, Transcript of protocadherin gamma subfamily A, 6, humanhuman

APPRIS P1 BASIC

Gene PCDHGA6, Length 5,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-202ENST00000610583 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
PCDHGA6-202ENST00000610583 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
PCDHGA6-202ENST00000610583 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
PCDHGA6-202ENST00000610583 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
PCDHGA6-202ENST00000610583 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
PCDHGA6-202ENST00000610583 APLP2Q06481 763 aa22.31■■□□□ 1.16
PCDHGA6-202ENST00000610583 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
PCDHGA6-202ENST00000610583 TTBK1Q5TCY1 1321 aaPredicted RBP21.86■■□□□ 1.09
PCDHGA6-202ENST00000610583 TRIM41Q8WV44 630 aa21.83■■□□□ 1.08
PCDHGA6-202ENST00000610583 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
PCDHGA6-202ENST00000610583 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
PCDHGA6-202ENST00000610583 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
PCDHGA6-202ENST00000610583 ATP1B4Q9UN42 357 aaPredicted RBP21.6■■□□□ 1.05
PCDHGA6-202ENST00000610583 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
PCDHGA6-202ENST00000610583 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
PCDHGA6-202ENST00000610583 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
PCDHGA6-202ENST00000610583 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
PCDHGA6-202ENST00000610583 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
PCDHGA6-202ENST00000610583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
PCDHGA6-202ENST00000610583 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
PCDHGA6-202ENST00000610583 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
PCDHGA6-202ENST00000610583 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
PCDHGA6-202ENST00000610583 ABCC9O60706 1549 aa20.83■□□□□ 0.93
PCDHGA6-202ENST00000610583 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
PCDHGA6-202ENST00000610583 ITGAEP38570 1179 aa20.81■□□□□ 0.92
PCDHGA6-202ENST00000610583 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
PCDHGA6-202ENST00000610583 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
PCDHGA6-202ENST00000610583 NEFLP07196 543 aa20.77■□□□□ 0.92
PCDHGA6-202ENST00000610583 YTHDC1Q96MU7 727 aaKnown RBP20.76■□□□□ 0.91
PCDHGA6-202ENST00000610583 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCDHGA6-202ENST00000610583 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
PCDHGA6-202ENST00000610583 HRCP23327 699 aa20.48■□□□□ 0.87
PCDHGA6-202ENST00000610583 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
PCDHGA6-202ENST00000610583 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
PCDHGA6-202ENST00000610583 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
PCDHGA6-202ENST00000610583 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
PCDHGA6-202ENST00000610583 FBLN2P98095 1184 aa20.19■□□□□ 0.82
PCDHGA6-202ENST00000610583 DAXXQ9UER7 740 aaPredicted RBP20.11■□□□□ 0.81
PCDHGA6-202ENST00000610583 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
PCDHGA6-202ENST00000610583 DIEXFQ68CQ4 756 aaKnown RBP20.05■□□□□ 0.8
PCDHGA6-202ENST00000610583 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
PCDHGA6-202ENST00000610583 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
PCDHGA6-202ENST00000610583 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
PCDHGA6-202ENST00000610583 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
PCDHGA6-202ENST00000610583 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
PCDHGA6-202ENST00000610583 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
PCDHGA6-202ENST00000610583 MYT1Q01538 1121 aa19.83■□□□□ 0.77
PCDHGA6-202ENST00000610583 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
PCDHGA6-202ENST00000610583 ANP32CO43423 234 aa19.79■□□□□ 0.76
PCDHGA6-202ENST00000610583 CDK11AQ9UQ88 783 aaPredicted RBP19.79■□□□□ 0.76
PCDHGA6-202ENST00000610583 ZNF777Q9ULD5 760 aaPredicted RBP19.77■□□□□ 0.76
PCDHGA6-202ENST00000610583 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
PCDHGA6-202ENST00000610583 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
PCDHGA6-202ENST00000610583 BCANQ96GW7 911 aa19.66■□□□□ 0.74
PCDHGA6-202ENST00000610583 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCDHGA6-202ENST00000610583 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
PCDHGA6-202ENST00000610583 NEFMP07197 916 aa19.53■□□□□ 0.72
PCDHGA6-202ENST00000610583 RTL5Q5HYW3 569 aaPredicted RBP19.53■□□□□ 0.72
PCDHGA6-202ENST00000610583 ZBTB47Q9UFB7 747 aaPredicted RBP19.53■□□□□ 0.72
PCDHGA6-202ENST00000610583 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
PCDHGA6-202ENST00000610583 SLC24A1O60721 1099 aa19.48■□□□□ 0.71
PCDHGA6-202ENST00000610583 CANXP27824 592 aaKnown RBP19.47■□□□□ 0.71
PCDHGA6-202ENST00000610583 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
PCDHGA6-202ENST00000610583 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
PCDHGA6-202ENST00000610583 CHGAP10645 457 aaKnown RBP19.44■□□□□ 0.7
PCDHGA6-202ENST00000610583 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
PCDHGA6-202ENST00000610583 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
PCDHGA6-202ENST00000610583 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
PCDHGA6-202ENST00000610583 DCAF1Q9Y4B6 1507 aa19.37■□□□□ 0.69
PCDHGA6-202ENST00000610583 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.68
PCDHGA6-202ENST00000610583 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
PCDHGA6-202ENST00000610583 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
PCDHGA6-202ENST00000610583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.68
PCDHGA6-202ENST00000610583 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
PCDHGA6-202ENST00000610583 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
PCDHGA6-202ENST00000610583 NACADO15069 1562 aa19.29■□□□□ 0.68
PCDHGA6-202ENST00000610583 RSF1Q96T23 1441 aaPredicted RBP19.28■□□□□ 0.68
PCDHGA6-202ENST00000610583 CLIP1P30622 1438 aa19.28■□□□□ 0.68
PCDHGA6-202ENST00000610583 DDX10Q13206 875 aaKnown RBP19.21■□□□□ 0.67
PCDHGA6-202ENST00000610583 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
PCDHGA6-202ENST00000610583 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.66
PCDHGA6-202ENST00000610583 EEA1Q15075 1411 aa19.2■□□□□ 0.66
PCDHGA6-202ENST00000610583 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
PCDHGA6-202ENST00000610583 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
PCDHGA6-202ENST00000610583 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
PCDHGA6-202ENST00000610583 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
PCDHGA6-202ENST00000610583 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
PCDHGA6-202ENST00000610583 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
PCDHGA6-202ENST00000610583 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
PCDHGA6-202ENST00000610583 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
PCDHGA6-202ENST00000610583 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
PCDHGA6-202ENST00000610583 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
PCDHGA6-202ENST00000610583 ANP32AP39687 249 aaKnown RBP19.07■□□□□ 0.64
PCDHGA6-202ENST00000610583 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
PCDHGA6-202ENST00000610583 SALL2Q9Y467 1007 aaPredicted RBP19.05■□□□□ 0.64
PCDHGA6-202ENST00000610583 FKBP8Q14318 412 aa19.05■□□□□ 0.64
PCDHGA6-202ENST00000610583 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
PCDHGA6-202ENST00000610583 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
PCDHGA6-202ENST00000610583 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
PCDHGA6-202ENST00000610583 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms