RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 NISCHQ9Y2I1 1504 aa32.69■■■□□ 2.82
PPARG-205ENST00000397010 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
PPARG-205ENST00000397010 ABCC9O60706 1549 aa27.52■■■□□ 2
PPARG-205ENST00000397010 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
PPARG-205ENST00000397010 DCAF8L2P0C7V8 631 aa27.09■■□□□ 1.93
PPARG-205ENST00000397010 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
PPARG-205ENST00000397010 NACADO15069 1562 aa26.81■■□□□ 1.88
PPARG-205ENST00000397010 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
PPARG-205ENST00000397010 RB1CC1Q8TDY2 1594 aa26.7■■□□□ 1.86
PPARG-205ENST00000397010 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
PPARG-205ENST00000397010 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
PPARG-205ENST00000397010 UNC13AQ9UPW8 1703 aa26.3■■□□□ 1.8
PPARG-205ENST00000397010 BICRAQ9NZM4 1560 aa25.93■■□□□ 1.74
PPARG-205ENST00000397010 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
PPARG-205ENST00000397010 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
PPARG-205ENST00000397010 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
PPARG-205ENST00000397010 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
PPARG-205ENST00000397010 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
PPARG-205ENST00000397010 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
PPARG-205ENST00000397010 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
PPARG-205ENST00000397010 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
PPARG-205ENST00000397010 WIZO95785 1651 aa25.1■■□□□ 1.61
PPARG-205ENST00000397010 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
PPARG-205ENST00000397010 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
PPARG-205ENST00000397010 ATAD2BQ9ULI0 1458 aa24.88■■□□□ 1.57
PPARG-205ENST00000397010 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
PPARG-205ENST00000397010 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
PPARG-205ENST00000397010 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
PPARG-205ENST00000397010 NCAPD3P42695 1498 aa24.7■■□□□ 1.55
PPARG-205ENST00000397010 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
PPARG-205ENST00000397010 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
PPARG-205ENST00000397010 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
PPARG-205ENST00000397010 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
PPARG-205ENST00000397010 CFTRP13569 1480 aa24.07■■□□□ 1.44
PPARG-205ENST00000397010 NESP48681 1621 aa24.05■■□□□ 1.44
PPARG-205ENST00000397010 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
PPARG-205ENST00000397010 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
PPARG-205ENST00000397010 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
PPARG-205ENST00000397010 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
PPARG-205ENST00000397010 KIF21AQ7Z4S6 1674 aa23.84■■□□□ 1.41
PPARG-205ENST00000397010 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
PPARG-205ENST00000397010 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
PPARG-205ENST00000397010 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
PPARG-205ENST00000397010 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
PPARG-205ENST00000397010 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
PPARG-205ENST00000397010 CUX1P39880 1505 aa23.66■■□□□ 1.38
PPARG-205ENST00000397010 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
PPARG-205ENST00000397010 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.37
PPARG-205ENST00000397010 TOP2BQ02880 1626 aa23.63■■□□□ 1.37
PPARG-205ENST00000397010 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
PPARG-205ENST00000397010 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
PPARG-205ENST00000397010 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
PPARG-205ENST00000397010 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
PPARG-205ENST00000397010 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
PPARG-205ENST00000397010 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
PPARG-205ENST00000397010 FGD5Q6ZNL6 1462 aa23.46■■□□□ 1.35
PPARG-205ENST00000397010 WDR62O43379 1518 aa23.44■■□□□ 1.34
PPARG-205ENST00000397010 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
PPARG-205ENST00000397010 SOGA1O94964 1423 aa23.32■■□□□ 1.32
PPARG-205ENST00000397010 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
PPARG-205ENST00000397010 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
PPARG-205ENST00000397010 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
PPARG-205ENST00000397010 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
PPARG-205ENST00000397010 CUX2O14529 1486 aa23.26■■□□□ 1.31
PPARG-205ENST00000397010 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
PPARG-205ENST00000397010 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.31
PPARG-205ENST00000397010 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
PPARG-205ENST00000397010 KIF27Q86VH2 1401 aa23.14■■□□□ 1.3
PPARG-205ENST00000397010 EEA1Q15075 1411 aa23.13■■□□□ 1.29
PPARG-205ENST00000397010 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
PPARG-205ENST00000397010 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
PPARG-205ENST00000397010 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
PPARG-205ENST00000397010 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
PPARG-205ENST00000397010 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
PPARG-205ENST00000397010 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.281e-6■■■■□ 26.2
PPARG-205ENST00000397010 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
PPARG-205ENST00000397010 CSRNP3Q8WYN3 585 aa23.03■■□□□ 1.28
PPARG-205ENST00000397010 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
PPARG-205ENST00000397010 IGF1RP08069 1367 aa22.95■■□□□ 1.26
PPARG-205ENST00000397010 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
PPARG-205ENST00000397010 KIF21BO75037 1637 aa22.95■■□□□ 1.26
PPARG-205ENST00000397010 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
PPARG-205ENST00000397010 CUL7Q14999 1698 aa22.92■■□□□ 1.26
PPARG-205ENST00000397010 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
PPARG-205ENST00000397010 PRXQ9BXM0 1461 aa22.9■■□□□ 1.26
PPARG-205ENST00000397010 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
PPARG-205ENST00000397010 ADAMTS12P58397 1594 aa22.85■■□□□ 1.25
PPARG-205ENST00000397010 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
PPARG-205ENST00000397010 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
PPARG-205ENST00000397010 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
PPARG-205ENST00000397010 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
PPARG-205ENST00000397010 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
PPARG-205ENST00000397010 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
PPARG-205ENST00000397010 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
PPARG-205ENST00000397010 CHD1O14646 1710 aa22.68■■□□□ 1.22
PPARG-205ENST00000397010 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
PPARG-205ENST00000397010 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
PPARG-205ENST00000397010 GRIN2AQ12879 1464 aa22.64■■□□□ 1.22
PPARG-205ENST00000397010 FBLN2P98095 1184 aa22.62■■□□□ 1.21
PPARG-205ENST00000397010 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms