RNA–Protein interactions for RNA: ENST00000413027.1

RPL3P2-204, Transcript of ribosomal protein L3 pseudogene 2, humanhuman

BASIC

Gene RPL3P2, Length 1,203 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P2-204ENST00000413027 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
RPL3P2-204ENST00000413027 CCDC180Q9P1Z9 1646 aa29.7■■■□□ 2.34
RPL3P2-204ENST00000413027 ABCC9O60706 1549 aa28.59■■■□□ 2.17
RPL3P2-204ENST00000413027 ZCCHC6Q5VYS8 1495 aaKnown RBP28■■■□□ 2.07
RPL3P2-204ENST00000413027 NACADO15069 1562 aa27.69■■■□□ 2.02
RPL3P2-204ENST00000413027 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
RPL3P2-204ENST00000413027 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
RPL3P2-204ENST00000413027 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
RPL3P2-204ENST00000413027 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
RPL3P2-204ENST00000413027 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
RPL3P2-204ENST00000413027 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
RPL3P2-204ENST00000413027 BICRAQ9NZM4 1560 aa26.89■■□□□ 1.9
RPL3P2-204ENST00000413027 PABPN1Q86U42 306 aaKnown RBP eCLIP26.66■■□□□ 1.86
RPL3P2-204ENST00000413027 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
RPL3P2-204ENST00000413027 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
RPL3P2-204ENST00000413027 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
RPL3P2-204ENST00000413027 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
RPL3P2-204ENST00000413027 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
RPL3P2-204ENST00000413027 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
RPL3P2-204ENST00000413027 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
RPL3P2-204ENST00000413027 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
RPL3P2-204ENST00000413027 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
RPL3P2-204ENST00000413027 WIZO95785 1651 aa25.63■■□□□ 1.69
RPL3P2-204ENST00000413027 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
RPL3P2-204ENST00000413027 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
RPL3P2-204ENST00000413027 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
RPL3P2-204ENST00000413027 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
RPL3P2-204ENST00000413027 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
RPL3P2-204ENST00000413027 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
RPL3P2-204ENST00000413027 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
RPL3P2-204ENST00000413027 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
RPL3P2-204ENST00000413027 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
RPL3P2-204ENST00000413027 NESP48681 1621 aa24.89■■□□□ 1.57
RPL3P2-204ENST00000413027 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
RPL3P2-204ENST00000413027 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
RPL3P2-204ENST00000413027 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
RPL3P2-204ENST00000413027 CFTRP13569 1480 aa24.73■■□□□ 1.55
RPL3P2-204ENST00000413027 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
RPL3P2-204ENST00000413027 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
RPL3P2-204ENST00000413027 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
RPL3P2-204ENST00000413027 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
RPL3P2-204ENST00000413027 THOC2Q8NI27 1593 aaKnown RBP24.53■■□□□ 1.52
RPL3P2-204ENST00000413027 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
RPL3P2-204ENST00000413027 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
RPL3P2-204ENST00000413027 WDR62O43379 1518 aa24.35■■□□□ 1.49
RPL3P2-204ENST00000413027 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
RPL3P2-204ENST00000413027 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
RPL3P2-204ENST00000413027 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
RPL3P2-204ENST00000413027 CUX1P39880 1505 aa24.22■■□□□ 1.47
RPL3P2-204ENST00000413027 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
RPL3P2-204ENST00000413027 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
RPL3P2-204ENST00000413027 CUX2O14529 1486 aa24.18■■□□□ 1.46
RPL3P2-204ENST00000413027 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
RPL3P2-204ENST00000413027 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
RPL3P2-204ENST00000413027 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
RPL3P2-204ENST00000413027 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
RPL3P2-204ENST00000413027 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
RPL3P2-204ENST00000413027 WDR97A6NE52 1622 aa24■■□□□ 1.43
RPL3P2-204ENST00000413027 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
RPL3P2-204ENST00000413027 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
RPL3P2-204ENST00000413027 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
RPL3P2-204ENST00000413027 EIF4G3O43432 1585 aaKnown RBP23.89■■□□□ 1.41
RPL3P2-204ENST00000413027 ZNF608Q9ULD9 1512 aaPredicted RBP23.85■■□□□ 1.41
RPL3P2-204ENST00000413027 SOGA1O94964 1423 aa23.84■■□□□ 1.41
RPL3P2-204ENST00000413027 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
RPL3P2-204ENST00000413027 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
RPL3P2-204ENST00000413027 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
RPL3P2-204ENST00000413027 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
RPL3P2-204ENST00000413027 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.38
RPL3P2-204ENST00000413027 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
RPL3P2-204ENST00000413027 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
RPL3P2-204ENST00000413027 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
RPL3P2-204ENST00000413027 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
RPL3P2-204ENST00000413027 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
RPL3P2-204ENST00000413027 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
RPL3P2-204ENST00000413027 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
RPL3P2-204ENST00000413027 CHD1O14646 1710 aa23.55■■□□□ 1.36
RPL3P2-204ENST00000413027 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
RPL3P2-204ENST00000413027 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
RPL3P2-204ENST00000413027 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
RPL3P2-204ENST00000413027 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
RPL3P2-204ENST00000413027 CUL7Q14999 1698 aa23.48■■□□□ 1.35
RPL3P2-204ENST00000413027 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
RPL3P2-204ENST00000413027 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
RPL3P2-204ENST00000413027 IGF1RP08069 1367 aa23.34■■□□□ 1.33
RPL3P2-204ENST00000413027 EEA1Q15075 1411 aa23.33■■□□□ 1.32
RPL3P2-204ENST00000413027 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
RPL3P2-204ENST00000413027 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
RPL3P2-204ENST00000413027 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
RPL3P2-204ENST00000413027 FBLN2P98095 1184 aa23.23■■□□□ 1.31
RPL3P2-204ENST00000413027 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
RPL3P2-204ENST00000413027 PRXQ9BXM0 1461 aa23.23■■□□□ 1.31
RPL3P2-204ENST00000413027 KIF21BO75037 1637 aa23.22■■□□□ 1.31
RPL3P2-204ENST00000413027 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
RPL3P2-204ENST00000413027 RAPGEF2Q9Y4G8 1499 aa23.2■■□□□ 1.3
RPL3P2-204ENST00000413027 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
RPL3P2-204ENST00000413027 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
RPL3P2-204ENST00000413027 NUP160Q12769 1436 aa23.17■■□□□ 1.3
RPL3P2-204ENST00000413027 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.29
RPL3P2-204ENST00000413027 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms