RNA–Protein interactions for RNA: ENST00000336625.12

HFE-203, Transcript of homeostatic iron regulator, humanhuman

TSL 1 (best) BASIC

Gene HFE, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFE-203ENST00000336625 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
HFE-203ENST00000336625 ABCC9O60706 1549 aa30.88■■■□□ 2.53
HFE-203ENST00000336625 CCDC180Q9P1Z9 1646 aa30.77■■■□□ 2.52
HFE-203ENST00000336625 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
HFE-203ENST00000336625 NACADO15069 1562 aa29.23■■■□□ 2.27
HFE-203ENST00000336625 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
HFE-203ENST00000336625 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
HFE-203ENST00000336625 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
HFE-203ENST00000336625 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
HFE-203ENST00000336625 UNC13AQ9UPW8 1703 aa28.5■■■□□ 2.15
HFE-203ENST00000336625 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
HFE-203ENST00000336625 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
HFE-203ENST00000336625 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
HFE-203ENST00000336625 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
HFE-203ENST00000336625 CECR2Q9BXF3 1484 aa27.92■■■□□ 2.06
HFE-203ENST00000336625 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
HFE-203ENST00000336625 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.05
HFE-203ENST00000336625 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
HFE-203ENST00000336625 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
HFE-203ENST00000336625 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
HFE-203ENST00000336625 CUX2O14529 1486 aa26.84■■□□□ 1.89
HFE-203ENST00000336625 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
HFE-203ENST00000336625 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
HFE-203ENST00000336625 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
HFE-203ENST00000336625 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
HFE-203ENST00000336625 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
HFE-203ENST00000336625 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
HFE-203ENST00000336625 BAZ1BQ9UIG0 1483 aaKnown RBP26.57■■□□□ 1.84
HFE-203ENST00000336625 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
HFE-203ENST00000336625 NESP48681 1621 aa26.43■■□□□ 1.82
HFE-203ENST00000336625 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
HFE-203ENST00000336625 PDS5BQ9NTI5 1447 aa26.33■■□□□ 1.81
HFE-203ENST00000336625 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
HFE-203ENST00000336625 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
HFE-203ENST00000336625 CADPSQ9ULU8 1353 aa26.2■■□□□ 1.78
HFE-203ENST00000336625 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
HFE-203ENST00000336625 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
HFE-203ENST00000336625 WIZO95785 1651 aa25.91■■□□□ 1.74
HFE-203ENST00000336625 WDR62O43379 1518 aa25.9■■□□□ 1.74
HFE-203ENST00000336625 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
HFE-203ENST00000336625 CFTRP13569 1480 aa25.81■■□□□ 1.72
HFE-203ENST00000336625 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
HFE-203ENST00000336625 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
HFE-203ENST00000336625 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
HFE-203ENST00000336625 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
HFE-203ENST00000336625 OSCARQ8IYS5 282 aa25.68■■□□□ 1.7
HFE-203ENST00000336625 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
HFE-203ENST00000336625 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
HFE-203ENST00000336625 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
HFE-203ENST00000336625 ABCC8Q09428 1581 aa25.4■■□□□ 1.66
HFE-203ENST00000336625 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
HFE-203ENST00000336625 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
HFE-203ENST00000336625 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
HFE-203ENST00000336625 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
HFE-203ENST00000336625 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
HFE-203ENST00000336625 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
HFE-203ENST00000336625 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
HFE-203ENST00000336625 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
HFE-203ENST00000336625 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
HFE-203ENST00000336625 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.6
HFE-203ENST00000336625 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
HFE-203ENST00000336625 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
HFE-203ENST00000336625 FBLN2P98095 1184 aa25■■□□□ 1.59
HFE-203ENST00000336625 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
HFE-203ENST00000336625 SOGA1O94964 1423 aa24.98■■□□□ 1.59
HFE-203ENST00000336625 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
HFE-203ENST00000336625 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
HFE-203ENST00000336625 RAD54L2Q9Y4B4 1467 aa24.87■■□□□ 1.57
HFE-203ENST00000336625 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
HFE-203ENST00000336625 CHD1O14646 1710 aa24.84■■□□□ 1.57
HFE-203ENST00000336625 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
HFE-203ENST00000336625 TRHP20396 242 aaPredicted RBP24.8■■□□□ 1.56
HFE-203ENST00000336625 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
HFE-203ENST00000336625 GRIN2BQ13224 1484 aa24.77■■□□□ 1.56
HFE-203ENST00000336625 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
HFE-203ENST00000336625 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
HFE-203ENST00000336625 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
HFE-203ENST00000336625 CUX1P39880 1505 aa24.72■■□□□ 1.55
HFE-203ENST00000336625 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
HFE-203ENST00000336625 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
HFE-203ENST00000336625 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.54
HFE-203ENST00000336625 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
HFE-203ENST00000336625 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
HFE-203ENST00000336625 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
HFE-203ENST00000336625 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
HFE-203ENST00000336625 ABCA5Q8WWZ7 1642 aa24.45■■□□□ 1.5
HFE-203ENST00000336625 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
HFE-203ENST00000336625 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
HFE-203ENST00000336625 NUP160Q12769 1436 aa24.35■■□□□ 1.49
HFE-203ENST00000336625 TOP2BQ02880 1626 aa24.33■■□□□ 1.49
HFE-203ENST00000336625 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
HFE-203ENST00000336625 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
HFE-203ENST00000336625 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
HFE-203ENST00000336625 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
HFE-203ENST00000336625 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
HFE-203ENST00000336625 JPH4Q96JJ6 628 aa24.2■■□□□ 1.46
HFE-203ENST00000336625 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
HFE-203ENST00000336625 ERCC6L2Q5T890 1561 aa24.15■■□□□ 1.46
HFE-203ENST00000336625 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
HFE-203ENST00000336625 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms