RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 NISCHQ9Y2I1 1504 aa35.43■■■■□ 3.26
LINC00116-203ENST00000611969 ABCC9O60706 1549 aa32.56■■■□□ 2.8
LINC00116-203ENST00000611969 CCDC180Q9P1Z9 1646 aa32.12■■■□□ 2.73
LINC00116-203ENST00000611969 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
LINC00116-203ENST00000611969 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
LINC00116-203ENST00000611969 NACADO15069 1562 aa30.39■■■□□ 2.46
LINC00116-203ENST00000611969 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
LINC00116-203ENST00000611969 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
LINC00116-203ENST00000611969 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
LINC00116-203ENST00000611969 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
LINC00116-203ENST00000611969 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
LINC00116-203ENST00000611969 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
LINC00116-203ENST00000611969 SHROOM4Q9ULL8 1493 aa29.38■■■□□ 2.29
LINC00116-203ENST00000611969 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
LINC00116-203ENST00000611969 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
LINC00116-203ENST00000611969 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
LINC00116-203ENST00000611969 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
LINC00116-203ENST00000611969 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
LINC00116-203ENST00000611969 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
LINC00116-203ENST00000611969 CUX2O14529 1486 aa28.23■■■□□ 2.11
LINC00116-203ENST00000611969 ERCC6Q03468 1493 aa28.1■■■□□ 2.09
LINC00116-203ENST00000611969 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
LINC00116-203ENST00000611969 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
LINC00116-203ENST00000611969 NESP48681 1621 aa27.86■■■□□ 2.05
LINC00116-203ENST00000611969 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
LINC00116-203ENST00000611969 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
LINC00116-203ENST00000611969 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
LINC00116-203ENST00000611969 THOC2Q8NI27 1593 aaKnown RBP27.75■■■□□ 2.03
LINC00116-203ENST00000611969 BAZ1BQ9UIG0 1483 aaKnown RBP27.61■■■□□ 2.01
LINC00116-203ENST00000611969 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
LINC00116-203ENST00000611969 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
LINC00116-203ENST00000611969 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
LINC00116-203ENST00000611969 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
LINC00116-203ENST00000611969 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
LINC00116-203ENST00000611969 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
LINC00116-203ENST00000611969 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
LINC00116-203ENST00000611969 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
LINC00116-203ENST00000611969 WDR62O43379 1518 aa27.18■■□□□ 1.94
LINC00116-203ENST00000611969 CADPSQ9ULU8 1353 aa27.11■■□□□ 1.93
LINC00116-203ENST00000611969 WIZO95785 1651 aa27.04■■□□□ 1.92
LINC00116-203ENST00000611969 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
LINC00116-203ENST00000611969 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
LINC00116-203ENST00000611969 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
LINC00116-203ENST00000611969 CFTRP13569 1480 aa26.74■■□□□ 1.87
LINC00116-203ENST00000611969 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
LINC00116-203ENST00000611969 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
LINC00116-203ENST00000611969 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
LINC00116-203ENST00000611969 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
LINC00116-203ENST00000611969 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
LINC00116-203ENST00000611969 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
LINC00116-203ENST00000611969 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
LINC00116-203ENST00000611969 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
LINC00116-203ENST00000611969 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
LINC00116-203ENST00000611969 IFT140Q96RY7 1462 aa26.41■■□□□ 1.82
LINC00116-203ENST00000611969 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
LINC00116-203ENST00000611969 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
LINC00116-203ENST00000611969 CHD1O14646 1710 aa26.34■■□□□ 1.81
LINC00116-203ENST00000611969 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
LINC00116-203ENST00000611969 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
LINC00116-203ENST00000611969 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
LINC00116-203ENST00000611969 ARAP1Q96P48 1450 aa26.2■■□□□ 1.78
LINC00116-203ENST00000611969 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
LINC00116-203ENST00000611969 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
LINC00116-203ENST00000611969 AQRO60306 1485 aaKnown RBP eCLIP26.13■■□□□ 1.772e-7■■■■■ 35
LINC00116-203ENST00000611969 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
LINC00116-203ENST00000611969 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
LINC00116-203ENST00000611969 FBLN2P98095 1184 aa25.97■■□□□ 1.75
LINC00116-203ENST00000611969 CLASP1Q7Z460 1538 aa25.95■■□□□ 1.74
LINC00116-203ENST00000611969 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
LINC00116-203ENST00000611969 SNAPC4Q5SXM2 1469 aa25.9■■□□□ 1.74
LINC00116-203ENST00000611969 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
LINC00116-203ENST00000611969 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
LINC00116-203ENST00000611969 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
LINC00116-203ENST00000611969 SOGA1O94964 1423 aa25.82■■□□□ 1.72
LINC00116-203ENST00000611969 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
LINC00116-203ENST00000611969 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
LINC00116-203ENST00000611969 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
LINC00116-203ENST00000611969 CUX1P39880 1505 aa25.73■■□□□ 1.71
LINC00116-203ENST00000611969 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
LINC00116-203ENST00000611969 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
LINC00116-203ENST00000611969 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
LINC00116-203ENST00000611969 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
LINC00116-203ENST00000611969 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
LINC00116-203ENST00000611969 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
LINC00116-203ENST00000611969 ERCC6L2Q5T890 1561 aa25.54■■□□□ 1.68
LINC00116-203ENST00000611969 ABCA10Q8WWZ4 1543 aa25.45■■□□□ 1.66
LINC00116-203ENST00000611969 ADAMTS12P58397 1594 aa25.41■■□□□ 1.66
LINC00116-203ENST00000611969 CEP170Q5SW79 1584 aa25.41■■□□□ 1.66
LINC00116-203ENST00000611969 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
LINC00116-203ENST00000611969 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
LINC00116-203ENST00000611969 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
LINC00116-203ENST00000611969 NUP160Q12769 1436 aa25.32■■□□□ 1.64
LINC00116-203ENST00000611969 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
LINC00116-203ENST00000611969 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
LINC00116-203ENST00000611969 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
LINC00116-203ENST00000611969 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
LINC00116-203ENST00000611969 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
LINC00116-203ENST00000611969 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
LINC00116-203ENST00000611969 RUSC2Q8N2Y8 1516 aa25.08■■□□□ 1.61
LINC00116-203ENST00000611969 DIP2BQ9P265 1576 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms