RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
GABRB3-219ENST00000636466 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
GABRB3-219ENST00000636466 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
GABRB3-219ENST00000636466 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
GABRB3-219ENST00000636466 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
GABRB3-219ENST00000636466 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
GABRB3-219ENST00000636466 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
GABRB3-219ENST00000636466 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
GABRB3-219ENST00000636466 RANGAP1P46060 587 aaPredicted RBP22.34■■□□□ 1.17
GABRB3-219ENST00000636466 APLP2Q06481 763 aa22.3■■□□□ 1.16
GABRB3-219ENST00000636466 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
GABRB3-219ENST00000636466 PPARGC1BQ86YN6 1023 aaKnown RBP21.99■■□□□ 1.11
GABRB3-219ENST00000636466 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
GABRB3-219ENST00000636466 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
GABRB3-219ENST00000636466 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
GABRB3-219ENST00000636466 LOC105371045A0A1W2PR82 267 aa21.81■■□□□ 1.08
GABRB3-219ENST00000636466 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.07
GABRB3-219ENST00000636466 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
GABRB3-219ENST00000636466 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
GABRB3-219ENST00000636466 YTHDC1Q96MU7 727 aaKnown RBP21.44■■□□□ 1.02
GABRB3-219ENST00000636466 ABCC9O60706 1549 aa21.41■■□□□ 1.02
GABRB3-219ENST00000636466 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
GABRB3-219ENST00000636466 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
GABRB3-219ENST00000636466 CENPBP07199 599 aaPredicted RBP21.37■■□□□ 1.01
GABRB3-219ENST00000636466 ITGAEP38570 1179 aa21.33■■□□□ 1.01
GABRB3-219ENST00000636466 HRCP23327 699 aa21.27■■□□□ 1
GABRB3-219ENST00000636466 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
GABRB3-219ENST00000636466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
GABRB3-219ENST00000636466 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
GABRB3-219ENST00000636466 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.93
GABRB3-219ENST00000636466 NEFLP07196 543 aa20.85■□□□□ 0.93
GABRB3-219ENST00000636466 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
GABRB3-219ENST00000636466 MYT1LQ9UL68 1186 aa20.76■□□□□ 0.91
GABRB3-219ENST00000636466 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
GABRB3-219ENST00000636466 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
GABRB3-219ENST00000636466 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
GABRB3-219ENST00000636466 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
GABRB3-219ENST00000636466 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
GABRB3-219ENST00000636466 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
GABRB3-219ENST00000636466 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
GABRB3-219ENST00000636466 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
GABRB3-219ENST00000636466 FBLN2P98095 1184 aa20.44■□□□□ 0.86
GABRB3-219ENST00000636466 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
GABRB3-219ENST00000636466 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
GABRB3-219ENST00000636466 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
GABRB3-219ENST00000636466 BCANQ96GW7 911 aa20.25■□□□□ 0.83
GABRB3-219ENST00000636466 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
GABRB3-219ENST00000636466 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.82
GABRB3-219ENST00000636466 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
GABRB3-219ENST00000636466 DAXXQ9UER7 740 aaPredicted RBP20.05■□□□□ 0.8
GABRB3-219ENST00000636466 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
GABRB3-219ENST00000636466 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
GABRB3-219ENST00000636466 ANP32CO43423 234 aa20.01■□□□□ 0.79
GABRB3-219ENST00000636466 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
GABRB3-219ENST00000636466 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
GABRB3-219ENST00000636466 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
GABRB3-219ENST00000636466 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
GABRB3-219ENST00000636466 MYT1Q01538 1121 aa19.86■□□□□ 0.77
GABRB3-219ENST00000636466 CHIC2Q9UKJ5 165 aa19.86■□□□□ 0.77
GABRB3-219ENST00000636466 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
GABRB3-219ENST00000636466 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
GABRB3-219ENST00000636466 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
GABRB3-219ENST00000636466 BCL11AQ9H165 835 aa19.77■□□□□ 0.76
GABRB3-219ENST00000636466 CLIP1P30622 1438 aa19.71■□□□□ 0.75
GABRB3-219ENST00000636466 CDK11AQ9UQ88 783 aaPredicted RBP19.7■□□□□ 0.74
GABRB3-219ENST00000636466 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
GABRB3-219ENST00000636466 TONSLQ96HA7 1378 aa19.68■□□□□ 0.74
GABRB3-219ENST00000636466 RTL5Q5HYW3 569 aaPredicted RBP19.64■□□□□ 0.73
GABRB3-219ENST00000636466 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
GABRB3-219ENST00000636466 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
GABRB3-219ENST00000636466 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
GABRB3-219ENST00000636466 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
GABRB3-219ENST00000636466 MIER1Q8N108 512 aa19.61■□□□□ 0.73
GABRB3-219ENST00000636466 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
GABRB3-219ENST00000636466 FKBP8Q14318 412 aa19.61■□□□□ 0.73
GABRB3-219ENST00000636466 HNRNPUQ00839 825 aaKnown RBP eCLIP19.61■□□□□ 0.73
GABRB3-219ENST00000636466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
GABRB3-219ENST00000636466 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
GABRB3-219ENST00000636466 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
GABRB3-219ENST00000636466 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
GABRB3-219ENST00000636466 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
GABRB3-219ENST00000636466 NACADO15069 1562 aa19.55■□□□□ 0.72
GABRB3-219ENST00000636466 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
GABRB3-219ENST00000636466 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
GABRB3-219ENST00000636466 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
GABRB3-219ENST00000636466 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
GABRB3-219ENST00000636466 SENP3-EIF4A1A0A087X0R7 540 aa19.5■□□□□ 0.71
GABRB3-219ENST00000636466 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
GABRB3-219ENST00000636466 SOGA1O94964 1423 aa19.49■□□□□ 0.71
GABRB3-219ENST00000636466 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
GABRB3-219ENST00000636466 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
GABRB3-219ENST00000636466 NPM2Q86SE8 214 aaKnown RBP19.45■□□□□ 0.7
GABRB3-219ENST00000636466 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
GABRB3-219ENST00000636466 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
GABRB3-219ENST00000636466 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
GABRB3-219ENST00000636466 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
GABRB3-219ENST00000636466 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
GABRB3-219ENST00000636466 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
GABRB3-219ENST00000636466 EEA1Q15075 1411 aa19.37■□□□□ 0.69
GABRB3-219ENST00000636466 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms