RNA–Protein interactions for RNA: ENST00000405727.6

ARFIP1-203, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene ARFIP1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-203ENST00000405727 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
ARFIP1-203ENST00000405727 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
ARFIP1-203ENST00000405727 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
ARFIP1-203ENST00000405727 ABCC9O60706 1549 aa26.74■■□□□ 1.87
ARFIP1-203ENST00000405727 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
ARFIP1-203ENST00000405727 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.85
ARFIP1-203ENST00000405727 MYO15BQ96JP2 1530 aa26.38■■□□□ 1.81
ARFIP1-203ENST00000405727 NACADO15069 1562 aa26.27■■□□□ 1.8
ARFIP1-203ENST00000405727 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
ARFIP1-203ENST00000405727 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
ARFIP1-203ENST00000405727 SCRIBQ14160 1630 aa25.94■■□□□ 1.74
ARFIP1-203ENST00000405727 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
ARFIP1-203ENST00000405727 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
ARFIP1-203ENST00000405727 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
ARFIP1-203ENST00000405727 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
ARFIP1-203ENST00000405727 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.61
ARFIP1-203ENST00000405727 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
ARFIP1-203ENST00000405727 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
ARFIP1-203ENST00000405727 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
ARFIP1-203ENST00000405727 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
ARFIP1-203ENST00000405727 WIZO95785 1651 aa24.74■■□□□ 1.55
ARFIP1-203ENST00000405727 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
ARFIP1-203ENST00000405727 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
ARFIP1-203ENST00000405727 TOP2AP11388 1531 aaKnown RBP24.48■■□□□ 1.51
ARFIP1-203ENST00000405727 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
ARFIP1-203ENST00000405727 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
ARFIP1-203ENST00000405727 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
ARFIP1-203ENST00000405727 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
ARFIP1-203ENST00000405727 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
ARFIP1-203ENST00000405727 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
ARFIP1-203ENST00000405727 CCDC88BA6NC98 1476 aa24.21■■□□□ 1.47
ARFIP1-203ENST00000405727 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
ARFIP1-203ENST00000405727 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
ARFIP1-203ENST00000405727 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
ARFIP1-203ENST00000405727 CFTRP13569 1480 aa23.67■■□□□ 1.38
ARFIP1-203ENST00000405727 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.38
ARFIP1-203ENST00000405727 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
ARFIP1-203ENST00000405727 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
ARFIP1-203ENST00000405727 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.36
ARFIP1-203ENST00000405727 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
ARFIP1-203ENST00000405727 NESP48681 1621 aa23.46■■□□□ 1.35
ARFIP1-203ENST00000405727 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
ARFIP1-203ENST00000405727 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
ARFIP1-203ENST00000405727 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
ARFIP1-203ENST00000405727 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
ARFIP1-203ENST00000405727 CUX1P39880 1505 aa23.33■■□□□ 1.32
ARFIP1-203ENST00000405727 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
ARFIP1-203ENST00000405727 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
ARFIP1-203ENST00000405727 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
ARFIP1-203ENST00000405727 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
ARFIP1-203ENST00000405727 SOGA1O94964 1423 aa23.19■■□□□ 1.3
ARFIP1-203ENST00000405727 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
ARFIP1-203ENST00000405727 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
ARFIP1-203ENST00000405727 EEA1Q15075 1411 aa23.12■■□□□ 1.29
ARFIP1-203ENST00000405727 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
ARFIP1-203ENST00000405727 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
ARFIP1-203ENST00000405727 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
ARFIP1-203ENST00000405727 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
ARFIP1-203ENST00000405727 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
ARFIP1-203ENST00000405727 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
ARFIP1-203ENST00000405727 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
ARFIP1-203ENST00000405727 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
ARFIP1-203ENST00000405727 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
ARFIP1-203ENST00000405727 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
ARFIP1-203ENST00000405727 CUX2O14529 1486 aa22.91■■□□□ 1.26
ARFIP1-203ENST00000405727 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
ARFIP1-203ENST00000405727 WDR62O43379 1518 aa22.87■■□□□ 1.25
ARFIP1-203ENST00000405727 KIF21BO75037 1637 aa22.86■■□□□ 1.25
ARFIP1-203ENST00000405727 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
ARFIP1-203ENST00000405727 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
ARFIP1-203ENST00000405727 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
ARFIP1-203ENST00000405727 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
ARFIP1-203ENST00000405727 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
ARFIP1-203ENST00000405727 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
ARFIP1-203ENST00000405727 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
ARFIP1-203ENST00000405727 IGF1RP08069 1367 aa22.73■■□□□ 1.23
ARFIP1-203ENST00000405727 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
ARFIP1-203ENST00000405727 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
ARFIP1-203ENST00000405727 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
ARFIP1-203ENST00000405727 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
ARFIP1-203ENST00000405727 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
ARFIP1-203ENST00000405727 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
ARFIP1-203ENST00000405727 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
ARFIP1-203ENST00000405727 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
ARFIP1-203ENST00000405727 CUL7Q14999 1698 aa22.61■■□□□ 1.21
ARFIP1-203ENST00000405727 CEP162Q5TB80 1403 aa22.6■■□□□ 1.21
ARFIP1-203ENST00000405727 PBRM1Q86U86 1689 aa22.57■■□□□ 1.2
ARFIP1-203ENST00000405727 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
ARFIP1-203ENST00000405727 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.2
ARFIP1-203ENST00000405727 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
ARFIP1-203ENST00000405727 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
ARFIP1-203ENST00000405727 CLIP1P30622 1438 aa22.44■■□□□ 1.18
ARFIP1-203ENST00000405727 ADAMTS12P58397 1594 aa22.43■■□□□ 1.18
ARFIP1-203ENST00000405727 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.18
ARFIP1-203ENST00000405727 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
ARFIP1-203ENST00000405727 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
ARFIP1-203ENST00000405727 CTTNBP2Q8WZ74 1663 aa22.35■■□□□ 1.17
ARFIP1-203ENST00000405727 MAGI1Q96QZ7 1491 aaPredicted RBP22.31■■□□□ 1.16
ARFIP1-203ENST00000405727 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
ARFIP1-203ENST00000405727 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms