RNA–Protein interactions for RNA: ENST00000590055.1

AP001269.2-201, humanhuman

TSL 3 BASIC

Gene AP001269.2, Length 379 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001269.2-201ENST00000590055 NISCHQ9Y2I1 1504 aa33.54■■■□□ 2.96
AP001269.2-201ENST00000590055 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
AP001269.2-201ENST00000590055 ABCC9O60706 1549 aa29.26■■■□□ 2.27
AP001269.2-201ENST00000590055 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
AP001269.2-201ENST00000590055 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
AP001269.2-201ENST00000590055 NACADO15069 1562 aa28.02■■■□□ 2.08
AP001269.2-201ENST00000590055 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
AP001269.2-201ENST00000590055 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
AP001269.2-201ENST00000590055 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
AP001269.2-201ENST00000590055 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
AP001269.2-201ENST00000590055 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
AP001269.2-201ENST00000590055 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
AP001269.2-201ENST00000590055 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
AP001269.2-201ENST00000590055 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
AP001269.2-201ENST00000590055 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
AP001269.2-201ENST00000590055 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
AP001269.2-201ENST00000590055 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
AP001269.2-201ENST00000590055 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
AP001269.2-201ENST00000590055 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
AP001269.2-201ENST00000590055 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
AP001269.2-201ENST00000590055 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
AP001269.2-201ENST00000590055 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
AP001269.2-201ENST00000590055 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
AP001269.2-201ENST00000590055 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
AP001269.2-201ENST00000590055 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
AP001269.2-201ENST00000590055 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
AP001269.2-201ENST00000590055 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
AP001269.2-201ENST00000590055 WIZO95785 1651 aa25.64■■□□□ 1.7
AP001269.2-201ENST00000590055 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
AP001269.2-201ENST00000590055 NESP48681 1621 aa25.33■■□□□ 1.65
AP001269.2-201ENST00000590055 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
AP001269.2-201ENST00000590055 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
AP001269.2-201ENST00000590055 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
AP001269.2-201ENST00000590055 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
AP001269.2-201ENST00000590055 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
AP001269.2-201ENST00000590055 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
AP001269.2-201ENST00000590055 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
AP001269.2-201ENST00000590055 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
AP001269.2-201ENST00000590055 CFTRP13569 1480 aa24.96■■□□□ 1.59
AP001269.2-201ENST00000590055 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
AP001269.2-201ENST00000590055 CUX2O14529 1486 aa24.87■■□□□ 1.57
AP001269.2-201ENST00000590055 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
AP001269.2-201ENST00000590055 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
AP001269.2-201ENST00000590055 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
AP001269.2-201ENST00000590055 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
AP001269.2-201ENST00000590055 WDR62O43379 1518 aa24.69■■□□□ 1.54
AP001269.2-201ENST00000590055 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
AP001269.2-201ENST00000590055 TOPBP1Q92547 1522 aa24.45■■□□□ 1.51
AP001269.2-201ENST00000590055 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
AP001269.2-201ENST00000590055 ABCC8Q09428 1581 aa24.39■■□□□ 1.5
AP001269.2-201ENST00000590055 CUX1P39880 1505 aa24.28■■□□□ 1.48
AP001269.2-201ENST00000590055 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
AP001269.2-201ENST00000590055 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
AP001269.2-201ENST00000590055 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
AP001269.2-201ENST00000590055 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
AP001269.2-201ENST00000590055 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
AP001269.2-201ENST00000590055 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
AP001269.2-201ENST00000590055 DNAJC5Q9H3Z4 198 aa24.15■■□□□ 1.46
AP001269.2-201ENST00000590055 SOGA1O94964 1423 aa24.15■■□□□ 1.46
AP001269.2-201ENST00000590055 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
AP001269.2-201ENST00000590055 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
AP001269.2-201ENST00000590055 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
AP001269.2-201ENST00000590055 AQRO60306 1485 aaKnown RBP eCLIP24.08■■□□□ 1.45
AP001269.2-201ENST00000590055 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
AP001269.2-201ENST00000590055 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
AP001269.2-201ENST00000590055 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
AP001269.2-201ENST00000590055 WDR97A6NE52 1622 aa24■■□□□ 1.43
AP001269.2-201ENST00000590055 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
AP001269.2-201ENST00000590055 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
AP001269.2-201ENST00000590055 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
AP001269.2-201ENST00000590055 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
AP001269.2-201ENST00000590055 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
AP001269.2-201ENST00000590055 CHD1O14646 1710 aa23.86■■□□□ 1.41
AP001269.2-201ENST00000590055 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
AP001269.2-201ENST00000590055 SNAPC4Q5SXM2 1469 aa23.84■■□□□ 1.41
AP001269.2-201ENST00000590055 FBLN2P98095 1184 aa23.83■■□□□ 1.41
AP001269.2-201ENST00000590055 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
AP001269.2-201ENST00000590055 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
AP001269.2-201ENST00000590055 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
AP001269.2-201ENST00000590055 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.37
AP001269.2-201ENST00000590055 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
AP001269.2-201ENST00000590055 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
AP001269.2-201ENST00000590055 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
AP001269.2-201ENST00000590055 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
AP001269.2-201ENST00000590055 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
AP001269.2-201ENST00000590055 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
AP001269.2-201ENST00000590055 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
AP001269.2-201ENST00000590055 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
AP001269.2-201ENST00000590055 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
AP001269.2-201ENST00000590055 IGF1RP08069 1367 aa23.51■■□□□ 1.35
AP001269.2-201ENST00000590055 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
AP001269.2-201ENST00000590055 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
AP001269.2-201ENST00000590055 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
AP001269.2-201ENST00000590055 CUL7Q14999 1698 aa23.44■■□□□ 1.34
AP001269.2-201ENST00000590055 NUP160Q12769 1436 aa23.42■■□□□ 1.34
AP001269.2-201ENST00000590055 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
AP001269.2-201ENST00000590055 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
AP001269.2-201ENST00000590055 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
AP001269.2-201ENST00000590055 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
AP001269.2-201ENST00000590055 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms