RNA–Protein interactions for RNA: ENST00000551917.5

SLC25A3-216, Transcript of solute carrier family 25 member 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SLC25A3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A3-216ENST00000551917 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
SLC25A3-216ENST00000551917 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
SLC25A3-216ENST00000551917 ABCC9O60706 1549 aa29.57■■■□□ 2.32
SLC25A3-216ENST00000551917 RB1CC1Q8TDY2 1594 aa28.36■■■□□ 2.13
SLC25A3-216ENST00000551917 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
SLC25A3-216ENST00000551917 NACADO15069 1562 aa28.27■■■□□ 2.12
SLC25A3-216ENST00000551917 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
SLC25A3-216ENST00000551917 ZCCHC6Q5VYS8 1495 aaKnown RBP27.91■■■□□ 2.06
SLC25A3-216ENST00000551917 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
SLC25A3-216ENST00000551917 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
SLC25A3-216ENST00000551917 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
SLC25A3-216ENST00000551917 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
SLC25A3-216ENST00000551917 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
SLC25A3-216ENST00000551917 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
SLC25A3-216ENST00000551917 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
SLC25A3-216ENST00000551917 EIF4G1Q04637 1599 aaKnown RBP26.78■■□□□ 1.88
SLC25A3-216ENST00000551917 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
SLC25A3-216ENST00000551917 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
SLC25A3-216ENST00000551917 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
SLC25A3-216ENST00000551917 BAZ1AQ9NRL2 1556 aaPredicted RBP26.08■■□□□ 1.77
SLC25A3-216ENST00000551917 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
SLC25A3-216ENST00000551917 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
SLC25A3-216ENST00000551917 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
SLC25A3-216ENST00000551917 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
SLC25A3-216ENST00000551917 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.74
SLC25A3-216ENST00000551917 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
SLC25A3-216ENST00000551917 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
SLC25A3-216ENST00000551917 WIZO95785 1651 aa25.64■■□□□ 1.69
SLC25A3-216ENST00000551917 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
SLC25A3-216ENST00000551917 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
SLC25A3-216ENST00000551917 NESP48681 1621 aa25.51■■□□□ 1.67
SLC25A3-216ENST00000551917 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
SLC25A3-216ENST00000551917 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
SLC25A3-216ENST00000551917 CUX2O14529 1486 aa25.31■■□□□ 1.64
SLC25A3-216ENST00000551917 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
SLC25A3-216ENST00000551917 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
SLC25A3-216ENST00000551917 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
SLC25A3-216ENST00000551917 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
SLC25A3-216ENST00000551917 CFTRP13569 1480 aa25.1■■□□□ 1.61
SLC25A3-216ENST00000551917 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
SLC25A3-216ENST00000551917 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
SLC25A3-216ENST00000551917 MRC2Q9UBG0 1479 aa25.01■■□□□ 1.59
SLC25A3-216ENST00000551917 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
SLC25A3-216ENST00000551917 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
SLC25A3-216ENST00000551917 WDR62O43379 1518 aa24.92■■□□□ 1.58
SLC25A3-216ENST00000551917 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
SLC25A3-216ENST00000551917 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
SLC25A3-216ENST00000551917 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
SLC25A3-216ENST00000551917 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
SLC25A3-216ENST00000551917 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
SLC25A3-216ENST00000551917 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
SLC25A3-216ENST00000551917 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
SLC25A3-216ENST00000551917 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
SLC25A3-216ENST00000551917 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
SLC25A3-216ENST00000551917 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
SLC25A3-216ENST00000551917 OSCARQ8IYS5 282 aa24.31■■□□□ 1.48
SLC25A3-216ENST00000551917 SOGA1O94964 1423 aa24.3■■□□□ 1.48
SLC25A3-216ENST00000551917 CUX1P39880 1505 aa24.3■■□□□ 1.48
SLC25A3-216ENST00000551917 EIF4G3O43432 1585 aaKnown RBP24.27■■□□□ 1.48
SLC25A3-216ENST00000551917 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SLC25A3-216ENST00000551917 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
SLC25A3-216ENST00000551917 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.479e-10■■■■■ 45.4
SLC25A3-216ENST00000551917 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
SLC25A3-216ENST00000551917 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
SLC25A3-216ENST00000551917 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
SLC25A3-216ENST00000551917 FBLN2P98095 1184 aa24.07■■□□□ 1.44
SLC25A3-216ENST00000551917 CHD1O14646 1710 aa24.07■■□□□ 1.44
SLC25A3-216ENST00000551917 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
SLC25A3-216ENST00000551917 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
SLC25A3-216ENST00000551917 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
SLC25A3-216ENST00000551917 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
SLC25A3-216ENST00000551917 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
SLC25A3-216ENST00000551917 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
SLC25A3-216ENST00000551917 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
SLC25A3-216ENST00000551917 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
SLC25A3-216ENST00000551917 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
SLC25A3-216ENST00000551917 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
SLC25A3-216ENST00000551917 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
SLC25A3-216ENST00000551917 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
SLC25A3-216ENST00000551917 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
SLC25A3-216ENST00000551917 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
SLC25A3-216ENST00000551917 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
SLC25A3-216ENST00000551917 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
SLC25A3-216ENST00000551917 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
SLC25A3-216ENST00000551917 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
SLC25A3-216ENST00000551917 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
SLC25A3-216ENST00000551917 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
SLC25A3-216ENST00000551917 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.39
SLC25A3-216ENST00000551917 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
SLC25A3-216ENST00000551917 GRIN2AQ12879 1464 aa23.69■■□□□ 1.38
SLC25A3-216ENST00000551917 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
SLC25A3-216ENST00000551917 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
SLC25A3-216ENST00000551917 NUP160Q12769 1436 aa23.58■■□□□ 1.37
SLC25A3-216ENST00000551917 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
SLC25A3-216ENST00000551917 IGF1RP08069 1367 aa23.55■■□□□ 1.36
SLC25A3-216ENST00000551917 CUL7Q14999 1698 aa23.5■■□□□ 1.35
SLC25A3-216ENST00000551917 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
SLC25A3-216ENST00000551917 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
SLC25A3-216ENST00000551917 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
SLC25A3-216ENST00000551917 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms