RNA–Protein interactions for RNA: ENST00000335633.1

LCE3B-201, Transcript of late cornified envelope 3B, humanhuman

APPRIS P1 BASIC

Gene LCE3B, Length 288 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3B-201ENST00000335633 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
LCE3B-201ENST00000335633 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
LCE3B-201ENST00000335633 ABCC9O60706 1549 aa30.17■■■□□ 2.42
LCE3B-201ENST00000335633 RB1CC1Q8TDY2 1594 aa28.83■■■□□ 2.21
LCE3B-201ENST00000335633 NACADO15069 1562 aa28.67■■■□□ 2.18
LCE3B-201ENST00000335633 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
LCE3B-201ENST00000335633 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
LCE3B-201ENST00000335633 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
LCE3B-201ENST00000335633 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
LCE3B-201ENST00000335633 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
LCE3B-201ENST00000335633 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
LCE3B-201ENST00000335633 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
LCE3B-201ENST00000335633 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.05
LCE3B-201ENST00000335633 SCRIBQ14160 1630 aa27.65■■■□□ 2.02
LCE3B-201ENST00000335633 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
LCE3B-201ENST00000335633 CC2D2AQ9P2K1 1620 aa27.25■■□□□ 1.95
LCE3B-201ENST00000335633 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
LCE3B-201ENST00000335633 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
LCE3B-201ENST00000335633 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
LCE3B-201ENST00000335633 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
LCE3B-201ENST00000335633 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
LCE3B-201ENST00000335633 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
LCE3B-201ENST00000335633 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
LCE3B-201ENST00000335633 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
LCE3B-201ENST00000335633 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
LCE3B-201ENST00000335633 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
LCE3B-201ENST00000335633 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
LCE3B-201ENST00000335633 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
LCE3B-201ENST00000335633 CUX2O14529 1486 aa25.95■■□□□ 1.74
LCE3B-201ENST00000335633 NESP48681 1621 aa25.92■■□□□ 1.74
LCE3B-201ENST00000335633 LAMC3Q9Y6N6 1575 aa25.84■■□□□ 1.73
LCE3B-201ENST00000335633 WIZO95785 1651 aa25.8■■□□□ 1.72
LCE3B-201ENST00000335633 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
LCE3B-201ENST00000335633 DNAJC5Q9H3Z4 198 aa25.71■■□□□ 1.71
LCE3B-201ENST00000335633 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
LCE3B-201ENST00000335633 THOC2Q8NI27 1593 aaKnown RBP25.63■■□□□ 1.69
LCE3B-201ENST00000335633 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
LCE3B-201ENST00000335633 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
LCE3B-201ENST00000335633 TOP2AP11388 1531 aaKnown RBP25.5■■□□□ 1.67
LCE3B-201ENST00000335633 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
LCE3B-201ENST00000335633 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
LCE3B-201ENST00000335633 CFTRP13569 1480 aa25.39■■□□□ 1.65
LCE3B-201ENST00000335633 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
LCE3B-201ENST00000335633 WDR62O43379 1518 aa25.34■■□□□ 1.65
LCE3B-201ENST00000335633 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
LCE3B-201ENST00000335633 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
LCE3B-201ENST00000335633 URB2Q14146 1524 aaKnown RBP25.1■■□□□ 1.61
LCE3B-201ENST00000335633 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
LCE3B-201ENST00000335633 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
LCE3B-201ENST00000335633 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
LCE3B-201ENST00000335633 OSCARQ8IYS5 282 aa24.83■■□□□ 1.57
LCE3B-201ENST00000335633 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
LCE3B-201ENST00000335633 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
LCE3B-201ENST00000335633 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
LCE3B-201ENST00000335633 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
LCE3B-201ENST00000335633 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
LCE3B-201ENST00000335633 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
LCE3B-201ENST00000335633 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
LCE3B-201ENST00000335633 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.53
LCE3B-201ENST00000335633 SOGA1O94964 1423 aa24.58■■□□□ 1.53
LCE3B-201ENST00000335633 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
LCE3B-201ENST00000335633 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
LCE3B-201ENST00000335633 CUX1P39880 1505 aa24.51■■□□□ 1.51
LCE3B-201ENST00000335633 FBLN2P98095 1184 aa24.48■■□□□ 1.51
LCE3B-201ENST00000335633 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
LCE3B-201ENST00000335633 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
LCE3B-201ENST00000335633 CHD1O14646 1710 aa24.44■■□□□ 1.5
LCE3B-201ENST00000335633 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
LCE3B-201ENST00000335633 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
LCE3B-201ENST00000335633 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
LCE3B-201ENST00000335633 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
LCE3B-201ENST00000335633 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
LCE3B-201ENST00000335633 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
LCE3B-201ENST00000335633 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
LCE3B-201ENST00000335633 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
LCE3B-201ENST00000335633 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
LCE3B-201ENST00000335633 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
LCE3B-201ENST00000335633 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
LCE3B-201ENST00000335633 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
LCE3B-201ENST00000335633 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
LCE3B-201ENST00000335633 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
LCE3B-201ENST00000335633 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LCE3B-201ENST00000335633 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
LCE3B-201ENST00000335633 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
LCE3B-201ENST00000335633 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
LCE3B-201ENST00000335633 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
LCE3B-201ENST00000335633 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
LCE3B-201ENST00000335633 GRIN2AQ12879 1464 aa24■■□□□ 1.43
LCE3B-201ENST00000335633 ADAMTS12P58397 1594 aa24■■□□□ 1.43
LCE3B-201ENST00000335633 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
LCE3B-201ENST00000335633 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
LCE3B-201ENST00000335633 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
LCE3B-201ENST00000335633 NUP160Q12769 1436 aa23.9■■□□□ 1.42
LCE3B-201ENST00000335633 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
LCE3B-201ENST00000335633 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
LCE3B-201ENST00000335633 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
LCE3B-201ENST00000335633 ERCC6L2Q5T890 1561 aa23.75■■□□□ 1.39
LCE3B-201ENST00000335633 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
LCE3B-201ENST00000335633 IGF1RP08069 1367 aa23.69■■□□□ 1.38
LCE3B-201ENST00000335633 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms