Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMC1Q8TDI8 AC007326.2-201ENST00000624224 7579 ntBASIC19.7■□□□□ 0.74
TMC1Q8TDI8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 AC107464.3-201ENST00000609172 737 ntBASIC19.7■□□□□ 0.74
TMC1Q8TDI8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMC1Q8TDI8 AL022313.4-201ENST00000562756 2046 ntBASIC19.69■□□□□ 0.74
TMC1Q8TDI8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 AC005618.3-201ENST00000624928 458 ntBASIC19.69■□□□□ 0.74
TMC1Q8TDI8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TMC1Q8TDI8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 AC006372.4-201ENST00000624122 1543 ntBASIC19.68■□□□□ 0.74
TMC1Q8TDI8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 HLA-DMA-203ENST00000395305 777 ntBASIC19.68■□□□□ 0.74
TMC1Q8TDI8 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 RPL18AP3-201ENST00000462885 528 ntBASIC19.68■□□□□ 0.74
TMC1Q8TDI8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 AC138701.2-201ENST00000553634 226 ntBASIC19.68■□□□□ 0.74
TMC1Q8TDI8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMC1Q8TDI8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms