RNA–Protein interactions for RNA: ENST00000415434.5

LINC01237-201, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4 BASIC

Gene LINC01237, Length 573 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-201ENST00000415434 NISCHQ9Y2I1 1504 aa35.14■■■■□ 3.22
LINC01237-201ENST00000415434 ABCC9O60706 1549 aa31.65■■■□□ 2.66
LINC01237-201ENST00000415434 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
LINC01237-201ENST00000415434 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
LINC01237-201ENST00000415434 NACADO15069 1562 aa29.9■■■□□ 2.38
LINC01237-201ENST00000415434 DNAJC5BQ9UF47 199 aa29.83■■■□□ 2.37
LINC01237-201ENST00000415434 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
LINC01237-201ENST00000415434 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
LINC01237-201ENST00000415434 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
LINC01237-201ENST00000415434 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
LINC01237-201ENST00000415434 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
LINC01237-201ENST00000415434 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
LINC01237-201ENST00000415434 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
LINC01237-201ENST00000415434 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
LINC01237-201ENST00000415434 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
LINC01237-201ENST00000415434 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
LINC01237-201ENST00000415434 CECR2Q9BXF3 1484 aa28.56■■■□□ 2.16
LINC01237-201ENST00000415434 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
LINC01237-201ENST00000415434 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
LINC01237-201ENST00000415434 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
LINC01237-201ENST00000415434 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
LINC01237-201ENST00000415434 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
LINC01237-201ENST00000415434 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
LINC01237-201ENST00000415434 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
LINC01237-201ENST00000415434 CUX2O14529 1486 aa27.39■■□□□ 1.98
LINC01237-201ENST00000415434 ERCC6Q03468 1493 aa27.33■■□□□ 1.97
LINC01237-201ENST00000415434 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
LINC01237-201ENST00000415434 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
LINC01237-201ENST00000415434 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
LINC01237-201ENST00000415434 NESP48681 1621 aa27.16■■□□□ 1.94
LINC01237-201ENST00000415434 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
LINC01237-201ENST00000415434 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
LINC01237-201ENST00000415434 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
LINC01237-201ENST00000415434 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
LINC01237-201ENST00000415434 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
LINC01237-201ENST00000415434 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
LINC01237-201ENST00000415434 WIZO95785 1651 aa26.67■■□□□ 1.86
LINC01237-201ENST00000415434 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
LINC01237-201ENST00000415434 WDR62O43379 1518 aa26.57■■□□□ 1.84
LINC01237-201ENST00000415434 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
LINC01237-201ENST00000415434 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
LINC01237-201ENST00000415434 CFTRP13569 1480 aa26.45■■□□□ 1.82
LINC01237-201ENST00000415434 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
LINC01237-201ENST00000415434 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
LINC01237-201ENST00000415434 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
LINC01237-201ENST00000415434 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
LINC01237-201ENST00000415434 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
LINC01237-201ENST00000415434 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
LINC01237-201ENST00000415434 PRDM2Q13029 1718 aa26.07■■□□□ 1.76
LINC01237-201ENST00000415434 IFT140Q96RY7 1462 aa25.97■■□□□ 1.75
LINC01237-201ENST00000415434 TOPBP1Q92547 1522 aa25.92■■□□□ 1.74
LINC01237-201ENST00000415434 ZNF608Q9ULD9 1512 aaPredicted RBP25.92■■□□□ 1.74
LINC01237-201ENST00000415434 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
LINC01237-201ENST00000415434 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
LINC01237-201ENST00000415434 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
LINC01237-201ENST00000415434 RIMBP3CA6NJZ7 1639 aa25.74■■□□□ 1.71
LINC01237-201ENST00000415434 RIMBP3BA6NNM3 1639 aa25.74■■□□□ 1.71
LINC01237-201ENST00000415434 RIMBP3Q9UFD9 1639 aa25.74■■□□□ 1.71
LINC01237-201ENST00000415434 TARBP1Q13395 1621 aaKnown RBP25.71■■□□□ 1.71
LINC01237-201ENST00000415434 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
LINC01237-201ENST00000415434 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
LINC01237-201ENST00000415434 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.7
LINC01237-201ENST00000415434 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
LINC01237-201ENST00000415434 CHD1O14646 1710 aa25.53■■□□□ 1.68
LINC01237-201ENST00000415434 SOGA1O94964 1423 aa25.51■■□□□ 1.67
LINC01237-201ENST00000415434 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
LINC01237-201ENST00000415434 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
LINC01237-201ENST00000415434 FGD5Q6ZNL6 1462 aa25.46■■□□□ 1.67
LINC01237-201ENST00000415434 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
LINC01237-201ENST00000415434 CUX1P39880 1505 aa25.43■■□□□ 1.66
LINC01237-201ENST00000415434 FBLN2P98095 1184 aa25.43■■□□□ 1.66
LINC01237-201ENST00000415434 ARAP1Q96P48 1450 aa25.42■■□□□ 1.66
LINC01237-201ENST00000415434 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
LINC01237-201ENST00000415434 MAGI1Q96QZ7 1491 aaPredicted RBP25.36■■□□□ 1.65
LINC01237-201ENST00000415434 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
LINC01237-201ENST00000415434 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
LINC01237-201ENST00000415434 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
LINC01237-201ENST00000415434 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
LINC01237-201ENST00000415434 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
LINC01237-201ENST00000415434 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
LINC01237-201ENST00000415434 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
LINC01237-201ENST00000415434 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
LINC01237-201ENST00000415434 PBRM1Q86U86 1689 aa25.15■■□□□ 1.62
LINC01237-201ENST00000415434 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.62
LINC01237-201ENST00000415434 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
LINC01237-201ENST00000415434 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
LINC01237-201ENST00000415434 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
LINC01237-201ENST00000415434 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
LINC01237-201ENST00000415434 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
LINC01237-201ENST00000415434 ADAMTS12P58397 1594 aa24.97■■□□□ 1.59
LINC01237-201ENST00000415434 NUP160Q12769 1436 aa24.96■■□□□ 1.59
LINC01237-201ENST00000415434 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
LINC01237-201ENST00000415434 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
LINC01237-201ENST00000415434 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
LINC01237-201ENST00000415434 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
LINC01237-201ENST00000415434 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
LINC01237-201ENST00000415434 PRG4Q92954 1404 aaPredicted RBP24.67■■□□□ 1.54
LINC01237-201ENST00000415434 JPH4Q96JJ6 628 aa24.64■■□□□ 1.54
LINC01237-201ENST00000415434 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
LINC01237-201ENST00000415434 IGF1RP08069 1367 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms