RNA–Protein interactions for RNA: ENST00000529619.5

PCDHA5-201, Transcript of protocadherin alpha 5, humanhuman

TSL 1 (best) BASIC

Gene PCDHA5, Length 4,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5-201ENST00000529619 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
PCDHA5-201ENST00000529619 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
PCDHA5-201ENST00000529619 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
PCDHA5-201ENST00000529619 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
PCDHA5-201ENST00000529619 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
PCDHA5-201ENST00000529619 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
PCDHA5-201ENST00000529619 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.29
PCDHA5-201ENST00000529619 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
PCDHA5-201ENST00000529619 HRCP23327 699 aa22.94■■□□□ 1.26
PCDHA5-201ENST00000529619 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
PCDHA5-201ENST00000529619 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
PCDHA5-201ENST00000529619 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
PCDHA5-201ENST00000529619 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
PCDHA5-201ENST00000529619 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
PCDHA5-201ENST00000529619 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
PCDHA5-201ENST00000529619 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
PCDHA5-201ENST00000529619 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
PCDHA5-201ENST00000529619 APLP2Q06481 763 aa22.22■■□□□ 1.15
PCDHA5-201ENST00000529619 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
PCDHA5-201ENST00000529619 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
PCDHA5-201ENST00000529619 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
PCDHA5-201ENST00000529619 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
PCDHA5-201ENST00000529619 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
PCDHA5-201ENST00000529619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
PCDHA5-201ENST00000529619 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
PCDHA5-201ENST00000529619 ABCC9O60706 1549 aa21.86■■□□□ 1.09
PCDHA5-201ENST00000529619 PELP1Q8IZL8 1130 aaKnown RBP21.85■■□□□ 1.09
PCDHA5-201ENST00000529619 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.09
PCDHA5-201ENST00000529619 SCRIBQ14160 1630 aa21.7■■□□□ 1.07
PCDHA5-201ENST00000529619 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
PCDHA5-201ENST00000529619 DIEXFQ68CQ4 756 aaKnown RBP21.62■■□□□ 1.05
PCDHA5-201ENST00000529619 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
PCDHA5-201ENST00000529619 ATP1B4Q9UN42 357 aaPredicted RBP21.49■■□□□ 1.03
PCDHA5-201ENST00000529619 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
PCDHA5-201ENST00000529619 ITGAEP38570 1179 aa21.4■■□□□ 1.02
PCDHA5-201ENST00000529619 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
PCDHA5-201ENST00000529619 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
PCDHA5-201ENST00000529619 ACIN1Q9UKV3 1341 aaKnown RBP21.27■■□□□ 1
PCDHA5-201ENST00000529619 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
PCDHA5-201ENST00000529619 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
PCDHA5-201ENST00000529619 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
PCDHA5-201ENST00000529619 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
PCDHA5-201ENST00000529619 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
PCDHA5-201ENST00000529619 NEFLP07196 543 aa21.02■□□□□ 0.96
PCDHA5-201ENST00000529619 MYT1Q01538 1121 aa21.01■□□□□ 0.95
PCDHA5-201ENST00000529619 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
PCDHA5-201ENST00000529619 NACADO15069 1562 aa20.91■□□□□ 0.94
PCDHA5-201ENST00000529619 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
PCDHA5-201ENST00000529619 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.94
PCDHA5-201ENST00000529619 MIER1Q8N108 512 aa20.8■□□□□ 0.92
PCDHA5-201ENST00000529619 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
PCDHA5-201ENST00000529619 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
PCDHA5-201ENST00000529619 CLIP1P30622 1438 aa20.76■□□□□ 0.91
PCDHA5-201ENST00000529619 SOGA1O94964 1423 aa20.74■□□□□ 0.91
PCDHA5-201ENST00000529619 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
PCDHA5-201ENST00000529619 EEA1Q15075 1411 aa20.73■□□□□ 0.91
PCDHA5-201ENST00000529619 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
PCDHA5-201ENST00000529619 BCANQ96GW7 911 aa20.72■□□□□ 0.91
PCDHA5-201ENST00000529619 P3H3Q8IVL6 736 aa20.71■□□□□ 0.91
PCDHA5-201ENST00000529619 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
PCDHA5-201ENST00000529619 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
PCDHA5-201ENST00000529619 WIZO95785 1651 aa20.68■□□□□ 0.9
PCDHA5-201ENST00000529619 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
PCDHA5-201ENST00000529619 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
PCDHA5-201ENST00000529619 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.89
PCDHA5-201ENST00000529619 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
PCDHA5-201ENST00000529619 ANP32CO43423 234 aa20.52■□□□□ 0.88
PCDHA5-201ENST00000529619 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
PCDHA5-201ENST00000529619 DDX10Q13206 875 aaKnown RBP20.48■□□□□ 0.87
PCDHA5-201ENST00000529619 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
PCDHA5-201ENST00000529619 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
PCDHA5-201ENST00000529619 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
PCDHA5-201ENST00000529619 FKBP8Q14318 412 aa20.36■□□□□ 0.85
PCDHA5-201ENST00000529619 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
PCDHA5-201ENST00000529619 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
PCDHA5-201ENST00000529619 CLSPNQ9HAW4 1339 aa20.33■□□□□ 0.84
PCDHA5-201ENST00000529619 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.84
PCDHA5-201ENST00000529619 TONSLQ96HA7 1378 aa20.27■□□□□ 0.84
PCDHA5-201ENST00000529619 KANK4Q5T7N3 995 aaPredicted RBP20.26■□□□□ 0.83
PCDHA5-201ENST00000529619 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
PCDHA5-201ENST00000529619 ZNF326Q5BKZ1 582 aaKnown RBP20.22■□□□□ 0.83
PCDHA5-201ENST00000529619 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
PCDHA5-201ENST00000529619 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
PCDHA5-201ENST00000529619 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
PCDHA5-201ENST00000529619 CHIC2Q9UKJ5 165 aa20.16■□□□□ 0.82
PCDHA5-201ENST00000529619 CDK11AQ9UQ88 783 aaPredicted RBP20.16■□□□□ 0.82
PCDHA5-201ENST00000529619 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
PCDHA5-201ENST00000529619 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.82
PCDHA5-201ENST00000529619 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
PCDHA5-201ENST00000529619 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
PCDHA5-201ENST00000529619 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
PCDHA5-201ENST00000529619 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
PCDHA5-201ENST00000529619 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
PCDHA5-201ENST00000529619 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.79
PCDHA5-201ENST00000529619 FBLN2P98095 1184 aa20.01■□□□□ 0.79
PCDHA5-201ENST00000529619 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
PCDHA5-201ENST00000529619 CUX2O14529 1486 aa19.99■□□□□ 0.79
PCDHA5-201ENST00000529619 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
PCDHA5-201ENST00000529619 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
PCDHA5-201ENST00000529619 DHX57Q6P158 1386 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms