RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
UBXN11-204ENST00000374217 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
UBXN11-204ENST00000374217 ABCC9O60706 1549 aa27.58■■■□□ 2.01
UBXN11-204ENST00000374217 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
UBXN11-204ENST00000374217 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
UBXN11-204ENST00000374217 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
UBXN11-204ENST00000374217 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
UBXN11-204ENST00000374217 NACADO15069 1562 aa26.93■■□□□ 1.9
UBXN11-204ENST00000374217 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
UBXN11-204ENST00000374217 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
UBXN11-204ENST00000374217 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
UBXN11-204ENST00000374217 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
UBXN11-204ENST00000374217 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.749e-7■■■□□ 16.4
UBXN11-204ENST00000374217 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
UBXN11-204ENST00000374217 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
UBXN11-204ENST00000374217 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
UBXN11-204ENST00000374217 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
UBXN11-204ENST00000374217 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
UBXN11-204ENST00000374217 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
UBXN11-204ENST00000374217 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
UBXN11-204ENST00000374217 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
UBXN11-204ENST00000374217 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
UBXN11-204ENST00000374217 WIZO95785 1651 aa25.1■■□□□ 1.61
UBXN11-204ENST00000374217 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
UBXN11-204ENST00000374217 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
UBXN11-204ENST00000374217 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
UBXN11-204ENST00000374217 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
UBXN11-204ENST00000374217 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
UBXN11-204ENST00000374217 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
UBXN11-204ENST00000374217 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
UBXN11-204ENST00000374217 HRCP23327 699 aa24.81■■□□□ 1.56
UBXN11-204ENST00000374217 HMGXB3Q12766 1538 aa24.77■■□□□ 1.56
UBXN11-204ENST00000374217 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.53
UBXN11-204ENST00000374217 DNAJC5Q9H3Z4 198 aa24.56■■□□□ 1.52
UBXN11-204ENST00000374217 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
UBXN11-204ENST00000374217 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
UBXN11-204ENST00000374217 CFTRP13569 1480 aa24.17■■□□□ 1.46
UBXN11-204ENST00000374217 PCGF6Q9BYE7 350 aa24.12■■□□□ 1.45
UBXN11-204ENST00000374217 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
UBXN11-204ENST00000374217 NESP48681 1621 aa24.06■■□□□ 1.44
UBXN11-204ENST00000374217 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
UBXN11-204ENST00000374217 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
UBXN11-204ENST00000374217 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
UBXN11-204ENST00000374217 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
UBXN11-204ENST00000374217 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
UBXN11-204ENST00000374217 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
UBXN11-204ENST00000374217 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
UBXN11-204ENST00000374217 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
UBXN11-204ENST00000374217 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
UBXN11-204ENST00000374217 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
UBXN11-204ENST00000374217 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
UBXN11-204ENST00000374217 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
UBXN11-204ENST00000374217 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
UBXN11-204ENST00000374217 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
UBXN11-204ENST00000374217 CUX1P39880 1505 aa23.7■■□□□ 1.38
UBXN11-204ENST00000374217 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
UBXN11-204ENST00000374217 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
UBXN11-204ENST00000374217 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
UBXN11-204ENST00000374217 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
UBXN11-204ENST00000374217 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
UBXN11-204ENST00000374217 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
UBXN11-204ENST00000374217 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
UBXN11-204ENST00000374217 WDR62O43379 1518 aa23.48■■□□□ 1.35
UBXN11-204ENST00000374217 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
UBXN11-204ENST00000374217 CUX2O14529 1486 aa23.46■■□□□ 1.35
UBXN11-204ENST00000374217 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
UBXN11-204ENST00000374217 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
UBXN11-204ENST00000374217 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
UBXN11-204ENST00000374217 SOGA1O94964 1423 aa23.42■■□□□ 1.34
UBXN11-204ENST00000374217 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
UBXN11-204ENST00000374217 EEA1Q15075 1411 aa23.35■■□□□ 1.33
UBXN11-204ENST00000374217 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
UBXN11-204ENST00000374217 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
UBXN11-204ENST00000374217 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
UBXN11-204ENST00000374217 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
UBXN11-204ENST00000374217 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
UBXN11-204ENST00000374217 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
UBXN11-204ENST00000374217 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
UBXN11-204ENST00000374217 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
UBXN11-204ENST00000374217 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
UBXN11-204ENST00000374217 GAPVD1Q14C86 1478 aa23.15■■□□□ 1.3
UBXN11-204ENST00000374217 MYT1Q01538 1121 aa23.14■■□□□ 1.29
UBXN11-204ENST00000374217 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
UBXN11-204ENST00000374217 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
UBXN11-204ENST00000374217 ZNF608Q9ULD9 1512 aaPredicted RBP23.12■■□□□ 1.29
UBXN11-204ENST00000374217 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.294e-14■■■■■ 52.8
UBXN11-204ENST00000374217 IGF1RP08069 1367 aa23.11■■□□□ 1.29
UBXN11-204ENST00000374217 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
UBXN11-204ENST00000374217 ERICH3Q5RHP9 1530 aa23.04■■□□□ 1.28
UBXN11-204ENST00000374217 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
UBXN11-204ENST00000374217 KIF21BO75037 1637 aa23.02■■□□□ 1.28
UBXN11-204ENST00000374217 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
UBXN11-204ENST00000374217 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
UBXN11-204ENST00000374217 PRXQ9BXM0 1461 aa23.01■■□□□ 1.27
UBXN11-204ENST00000374217 GOLGA3Q08378 1498 aa23■■□□□ 1.27
UBXN11-204ENST00000374217 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
UBXN11-204ENST00000374217 CUL7Q14999 1698 aa22.98■■□□□ 1.27
UBXN11-204ENST00000374217 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
UBXN11-204ENST00000374217 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
UBXN11-204ENST00000374217 FHAD1B1AJZ9 1412 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms