RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
UBAP1-202ENST00000359544 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
UBAP1-202ENST00000359544 ABCC9O60706 1549 aa27.1■■□□□ 1.93
UBAP1-202ENST00000359544 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
UBAP1-202ENST00000359544 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
UBAP1-202ENST00000359544 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
UBAP1-202ENST00000359544 NACADO15069 1562 aa25.8■■□□□ 1.72
UBAP1-202ENST00000359544 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
UBAP1-202ENST00000359544 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
UBAP1-202ENST00000359544 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
UBAP1-202ENST00000359544 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
UBAP1-202ENST00000359544 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
UBAP1-202ENST00000359544 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
UBAP1-202ENST00000359544 HRCP23327 699 aa25.09■■□□□ 1.61
UBAP1-202ENST00000359544 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
UBAP1-202ENST00000359544 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
UBAP1-202ENST00000359544 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
UBAP1-202ENST00000359544 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
UBAP1-202ENST00000359544 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
UBAP1-202ENST00000359544 PELP1Q8IZL8 1130 aaKnown RBP24.41■■□□□ 1.5
UBAP1-202ENST00000359544 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
UBAP1-202ENST00000359544 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
UBAP1-202ENST00000359544 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
UBAP1-202ENST00000359544 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
UBAP1-202ENST00000359544 SMARCA4P51532 1647 aa24.08■■□□□ 1.45
UBAP1-202ENST00000359544 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
UBAP1-202ENST00000359544 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
UBAP1-202ENST00000359544 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
UBAP1-202ENST00000359544 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
UBAP1-202ENST00000359544 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
UBAP1-202ENST00000359544 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
UBAP1-202ENST00000359544 WIZO95785 1651 aa23.8■■□□□ 1.4
UBAP1-202ENST00000359544 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
UBAP1-202ENST00000359544 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
UBAP1-202ENST00000359544 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
UBAP1-202ENST00000359544 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
UBAP1-202ENST00000359544 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
UBAP1-202ENST00000359544 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
UBAP1-202ENST00000359544 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
UBAP1-202ENST00000359544 MYT1Q01538 1121 aa23.56■■□□□ 1.36
UBAP1-202ENST00000359544 NESP48681 1621 aa23.49■■□□□ 1.35
UBAP1-202ENST00000359544 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
UBAP1-202ENST00000359544 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
UBAP1-202ENST00000359544 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
UBAP1-202ENST00000359544 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
UBAP1-202ENST00000359544 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
UBAP1-202ENST00000359544 ACIN1Q9UKV3 1341 aaKnown RBP23.15■■□□□ 1.3
UBAP1-202ENST00000359544 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
UBAP1-202ENST00000359544 CFTRP13569 1480 aa23.09■■□□□ 1.29
UBAP1-202ENST00000359544 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
UBAP1-202ENST00000359544 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
UBAP1-202ENST00000359544 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
UBAP1-202ENST00000359544 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
UBAP1-202ENST00000359544 THOC2Q8NI27 1593 aaKnown RBP22.94■■□□□ 1.26
UBAP1-202ENST00000359544 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
UBAP1-202ENST00000359544 GTF3C3Q9Y5Q9 886 aa22.87■■□□□ 1.25
UBAP1-202ENST00000359544 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
UBAP1-202ENST00000359544 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
UBAP1-202ENST00000359544 CUX2O14529 1486 aa22.83■■□□□ 1.24
UBAP1-202ENST00000359544 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
UBAP1-202ENST00000359544 PRDM2Q13029 1718 aa22.78■■□□□ 1.24
UBAP1-202ENST00000359544 WDR62O43379 1518 aa22.75■■□□□ 1.23
UBAP1-202ENST00000359544 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
UBAP1-202ENST00000359544 CCER1Q8TC90 406 aaPredicted RBP22.69■■□□□ 1.22
UBAP1-202ENST00000359544 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
UBAP1-202ENST00000359544 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
UBAP1-202ENST00000359544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
UBAP1-202ENST00000359544 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
UBAP1-202ENST00000359544 CUX1P39880 1505 aa22.53■■□□□ 1.2
UBAP1-202ENST00000359544 ABCC8Q09428 1581 aa22.52■■□□□ 1.2
UBAP1-202ENST00000359544 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
UBAP1-202ENST00000359544 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
UBAP1-202ENST00000359544 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
UBAP1-202ENST00000359544 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
UBAP1-202ENST00000359544 EHMT2Q96KQ7 1210 aa22.41■■□□□ 1.18
UBAP1-202ENST00000359544 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
UBAP1-202ENST00000359544 SOGA1O94964 1423 aa22.39■■□□□ 1.17
UBAP1-202ENST00000359544 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
UBAP1-202ENST00000359544 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
UBAP1-202ENST00000359544 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.173e-7■■■■□ 26.1
UBAP1-202ENST00000359544 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
UBAP1-202ENST00000359544 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
UBAP1-202ENST00000359544 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
UBAP1-202ENST00000359544 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
UBAP1-202ENST00000359544 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
UBAP1-202ENST00000359544 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
UBAP1-202ENST00000359544 YTHDC1Q96MU7 727 aaKnown RBP22.21■■□□□ 1.15
UBAP1-202ENST00000359544 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
UBAP1-202ENST00000359544 FBLN2P98095 1184 aa22.18■■□□□ 1.14
UBAP1-202ENST00000359544 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
UBAP1-202ENST00000359544 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
UBAP1-202ENST00000359544 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
UBAP1-202ENST00000359544 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
UBAP1-202ENST00000359544 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
UBAP1-202ENST00000359544 MIER1Q8N108 512 aa22.09■■□□□ 1.13
UBAP1-202ENST00000359544 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
UBAP1-202ENST00000359544 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
UBAP1-202ENST00000359544 GRIN2BQ13224 1484 aa22.05■■□□□ 1.12
UBAP1-202ENST00000359544 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
UBAP1-202ENST00000359544 CEP162Q5TB80 1403 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms