RNA–Protein interactions for RNA: ENST00000307641.9

NKIRAS2-201, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKIRAS2, Length 2,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-201ENST00000307641 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
NKIRAS2-201ENST00000307641 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
NKIRAS2-201ENST00000307641 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
NKIRAS2-201ENST00000307641 HRCP23327 699 aa24.73■■□□□ 1.55
NKIRAS2-201ENST00000307641 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
NKIRAS2-201ENST00000307641 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
NKIRAS2-201ENST00000307641 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
NKIRAS2-201ENST00000307641 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
NKIRAS2-201ENST00000307641 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
NKIRAS2-201ENST00000307641 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.42
NKIRAS2-201ENST00000307641 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
NKIRAS2-201ENST00000307641 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
NKIRAS2-201ENST00000307641 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
NKIRAS2-201ENST00000307641 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
NKIRAS2-201ENST00000307641 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
NKIRAS2-201ENST00000307641 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
NKIRAS2-201ENST00000307641 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
NKIRAS2-201ENST00000307641 ABCC9O60706 1549 aa23.05■■□□□ 1.28
NKIRAS2-201ENST00000307641 TRIM41Q8WV44 630 aa22.98■■□□□ 1.27
NKIRAS2-201ENST00000307641 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
NKIRAS2-201ENST00000307641 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
NKIRAS2-201ENST00000307641 ACIN1Q9UKV3 1341 aaKnown RBP22.77■■□□□ 1.24
NKIRAS2-201ENST00000307641 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
NKIRAS2-201ENST00000307641 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
NKIRAS2-201ENST00000307641 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
NKIRAS2-201ENST00000307641 MYT1Q01538 1121 aa22.63■■□□□ 1.21
NKIRAS2-201ENST00000307641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
NKIRAS2-201ENST00000307641 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
NKIRAS2-201ENST00000307641 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
NKIRAS2-201ENST00000307641 CENPBP07199 599 aaPredicted RBP22.56■■□□□ 1.2
NKIRAS2-201ENST00000307641 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
NKIRAS2-201ENST00000307641 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
NKIRAS2-201ENST00000307641 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
NKIRAS2-201ENST00000307641 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
NKIRAS2-201ENST00000307641 NACADO15069 1562 aa22.22■■□□□ 1.15
NKIRAS2-201ENST00000307641 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
NKIRAS2-201ENST00000307641 ZNF316A6NFI3 1004 aaPredicted RBP22.17■■□□□ 1.14
NKIRAS2-201ENST00000307641 WIZO95785 1651 aa22.13■■□□□ 1.13
NKIRAS2-201ENST00000307641 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
NKIRAS2-201ENST00000307641 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
NKIRAS2-201ENST00000307641 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
NKIRAS2-201ENST00000307641 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
NKIRAS2-201ENST00000307641 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.12
NKIRAS2-201ENST00000307641 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
NKIRAS2-201ENST00000307641 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
NKIRAS2-201ENST00000307641 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
NKIRAS2-201ENST00000307641 MIER1Q8N108 512 aa21.92■■□□□ 1.1
NKIRAS2-201ENST00000307641 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
NKIRAS2-201ENST00000307641 SOGA1O94964 1423 aa21.85■■□□□ 1.09
NKIRAS2-201ENST00000307641 EEA1Q15075 1411 aa21.83■■□□□ 1.09
NKIRAS2-201ENST00000307641 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
NKIRAS2-201ENST00000307641 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
NKIRAS2-201ENST00000307641 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
NKIRAS2-201ENST00000307641 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
NKIRAS2-201ENST00000307641 GOLGA3Q08378 1498 aa21.73■■□□□ 1.07
NKIRAS2-201ENST00000307641 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
NKIRAS2-201ENST00000307641 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
NKIRAS2-201ENST00000307641 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
NKIRAS2-201ENST00000307641 CLSPNQ9HAW4 1339 aa21.66■■□□□ 1.06
NKIRAS2-201ENST00000307641 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
NKIRAS2-201ENST00000307641 SMARCA4P51532 1647 aa21.58■■□□□ 1.05
NKIRAS2-201ENST00000307641 SUPT16HQ9Y5B9 1047 aaKnown RBP21.53■■□□□ 1.04
NKIRAS2-201ENST00000307641 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
NKIRAS2-201ENST00000307641 CLIP1P30622 1438 aa21.52■■□□□ 1.04
NKIRAS2-201ENST00000307641 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
NKIRAS2-201ENST00000307641 APLP2Q06481 763 aa21.49■■□□□ 1.03
NKIRAS2-201ENST00000307641 KIF21BO75037 1637 aa21.47■■□□□ 1.03
NKIRAS2-201ENST00000307641 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
NKIRAS2-201ENST00000307641 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
NKIRAS2-201ENST00000307641 TSHZ2Q9NRE2 1034 aa21.36■■□□□ 1.01
NKIRAS2-201ENST00000307641 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
NKIRAS2-201ENST00000307641 SYNJ1O43426 1573 aa21.3■■□□□ 1
NKIRAS2-201ENST00000307641 RAPGEF2Q9Y4G8 1499 aa21.28■■□□□ 1
NKIRAS2-201ENST00000307641 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
NKIRAS2-201ENST00000307641 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
NKIRAS2-201ENST00000307641 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
NKIRAS2-201ENST00000307641 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
NKIRAS2-201ENST00000307641 CUX2O14529 1486 aa21.08■□□□□ 0.97
NKIRAS2-201ENST00000307641 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
NKIRAS2-201ENST00000307641 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
NKIRAS2-201ENST00000307641 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
NKIRAS2-201ENST00000307641 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
NKIRAS2-201ENST00000307641 BCANQ96GW7 911 aa21.02■□□□□ 0.96
NKIRAS2-201ENST00000307641 FKBP8Q14318 412 aa21■□□□□ 0.95
NKIRAS2-201ENST00000307641 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
NKIRAS2-201ENST00000307641 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
NKIRAS2-201ENST00000307641 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
NKIRAS2-201ENST00000307641 ATAD2BQ9ULI0 1458 aa20.94■□□□□ 0.94
NKIRAS2-201ENST00000307641 NEFLP07196 543 aa20.9■□□□□ 0.94
NKIRAS2-201ENST00000307641 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
NKIRAS2-201ENST00000307641 ITGAEP38570 1179 aa20.89■□□□□ 0.94
NKIRAS2-201ENST00000307641 MAPKBP1O60336 1514 aa20.89■□□□□ 0.93
NKIRAS2-201ENST00000307641 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
NKIRAS2-201ENST00000307641 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
NKIRAS2-201ENST00000307641 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
NKIRAS2-201ENST00000307641 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
NKIRAS2-201ENST00000307641 CCER2I3L3R5 266 aa20.79■□□□□ 0.92
NKIRAS2-201ENST00000307641 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
NKIRAS2-201ENST00000307641 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
NKIRAS2-201ENST00000307641 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms