RNA–Protein interactions for RNA: ENST00000398979.7

TMEM216-202, Transcript of transmembrane protein 216, humanhuman

TSL 1 (best) BASIC

Gene TMEM216, Length 908 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM216-202ENST00000398979 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
TMEM216-202ENST00000398979 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
TMEM216-202ENST00000398979 ABCC9O60706 1549 aa29.17■■■□□ 2.26
TMEM216-202ENST00000398979 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
TMEM216-202ENST00000398979 DCAF1Q9Y4B6 1507 aa27.99■■■□□ 2.07
TMEM216-202ENST00000398979 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
TMEM216-202ENST00000398979 NACADO15069 1562 aa27.94■■■□□ 2.06
TMEM216-202ENST00000398979 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
TMEM216-202ENST00000398979 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
TMEM216-202ENST00000398979 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
TMEM216-202ENST00000398979 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
TMEM216-202ENST00000398979 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
TMEM216-202ENST00000398979 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
TMEM216-202ENST00000398979 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
TMEM216-202ENST00000398979 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
TMEM216-202ENST00000398979 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
TMEM216-202ENST00000398979 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
TMEM216-202ENST00000398979 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
TMEM216-202ENST00000398979 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
TMEM216-202ENST00000398979 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
TMEM216-202ENST00000398979 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
TMEM216-202ENST00000398979 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
TMEM216-202ENST00000398979 SMARCA2P51531 1590 aa25.85■■□□□ 1.73
TMEM216-202ENST00000398979 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
TMEM216-202ENST00000398979 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
TMEM216-202ENST00000398979 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
TMEM216-202ENST00000398979 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
TMEM216-202ENST00000398979 WIZO95785 1651 aa25.69■■□□□ 1.7
TMEM216-202ENST00000398979 BAZ1BQ9UIG0 1483 aaKnown RBP25.64■■□□□ 1.69
TMEM216-202ENST00000398979 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
TMEM216-202ENST00000398979 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
TMEM216-202ENST00000398979 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
TMEM216-202ENST00000398979 NESP48681 1621 aa25.15■■□□□ 1.62
TMEM216-202ENST00000398979 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
TMEM216-202ENST00000398979 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
TMEM216-202ENST00000398979 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
TMEM216-202ENST00000398979 CFTRP13569 1480 aa24.97■■□□□ 1.59
TMEM216-202ENST00000398979 CUX2O14529 1486 aa24.89■■□□□ 1.58
TMEM216-202ENST00000398979 PDS5BQ9NTI5 1447 aa24.84■■□□□ 1.57
TMEM216-202ENST00000398979 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
TMEM216-202ENST00000398979 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
TMEM216-202ENST00000398979 THOC2Q8NI27 1593 aaKnown RBP24.74■■□□□ 1.55
TMEM216-202ENST00000398979 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
TMEM216-202ENST00000398979 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
TMEM216-202ENST00000398979 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.52
TMEM216-202ENST00000398979 DNAJC5Q9H3Z4 198 aa24.56■■□□□ 1.52
TMEM216-202ENST00000398979 WDR62O43379 1518 aa24.48■■□□□ 1.51
TMEM216-202ENST00000398979 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
TMEM216-202ENST00000398979 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
TMEM216-202ENST00000398979 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
TMEM216-202ENST00000398979 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
TMEM216-202ENST00000398979 TOPBP1Q92547 1522 aa24.37■■□□□ 1.49
TMEM216-202ENST00000398979 CUX1P39880 1505 aa24.34■■□□□ 1.49
TMEM216-202ENST00000398979 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
TMEM216-202ENST00000398979 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
TMEM216-202ENST00000398979 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
TMEM216-202ENST00000398979 POLA1P09884 1462 aaPredicted RBP24.19■■□□□ 1.46
TMEM216-202ENST00000398979 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
TMEM216-202ENST00000398979 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
TMEM216-202ENST00000398979 SOGA1O94964 1423 aa24.11■■□□□ 1.45
TMEM216-202ENST00000398979 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
TMEM216-202ENST00000398979 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
TMEM216-202ENST00000398979 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
TMEM216-202ENST00000398979 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
TMEM216-202ENST00000398979 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
TMEM216-202ENST00000398979 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
TMEM216-202ENST00000398979 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
TMEM216-202ENST00000398979 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
TMEM216-202ENST00000398979 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
TMEM216-202ENST00000398979 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
TMEM216-202ENST00000398979 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
TMEM216-202ENST00000398979 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.41
TMEM216-202ENST00000398979 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
TMEM216-202ENST00000398979 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
TMEM216-202ENST00000398979 GRIN2BQ13224 1484 aa23.8■■□□□ 1.4
TMEM216-202ENST00000398979 ERICH3Q5RHP9 1530 aa23.75■■□□□ 1.39
TMEM216-202ENST00000398979 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
TMEM216-202ENST00000398979 EEA1Q15075 1411 aa23.74■■□□□ 1.39
TMEM216-202ENST00000398979 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
TMEM216-202ENST00000398979 FBLN2P98095 1184 aa23.7■■□□□ 1.38
TMEM216-202ENST00000398979 IGF1RP08069 1367 aa23.67■■□□□ 1.38
TMEM216-202ENST00000398979 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
TMEM216-202ENST00000398979 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
TMEM216-202ENST00000398979 CHD1O14646 1710 aa23.62■■□□□ 1.37
TMEM216-202ENST00000398979 CUL7Q14999 1698 aa23.62■■□□□ 1.37
TMEM216-202ENST00000398979 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
TMEM216-202ENST00000398979 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
TMEM216-202ENST00000398979 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
TMEM216-202ENST00000398979 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
TMEM216-202ENST00000398979 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
TMEM216-202ENST00000398979 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
TMEM216-202ENST00000398979 RIMBP3CA6NJZ7 1639 aa23.51■■□□□ 1.35
TMEM216-202ENST00000398979 RIMBP3BA6NNM3 1639 aa23.51■■□□□ 1.35
TMEM216-202ENST00000398979 RIMBP3Q9UFD9 1639 aa23.51■■□□□ 1.35
TMEM216-202ENST00000398979 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
TMEM216-202ENST00000398979 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
TMEM216-202ENST00000398979 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
TMEM216-202ENST00000398979 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
TMEM216-202ENST00000398979 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
TMEM216-202ENST00000398979 KIF21BO75037 1637 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms