RNA–Protein interactions for RNA: ENST00000602312.2

SDR42E2-201, Transcript of short chain dehydrogenase/reductase family 42E, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDR42E2, Length 2,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E2-201ENST00000602312 NISCHQ9Y2I1 1504 aa31.74■■■□□ 2.67
SDR42E2-201ENST00000602312 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
SDR42E2-201ENST00000602312 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
SDR42E2-201ENST00000602312 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
SDR42E2-201ENST00000602312 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
SDR42E2-201ENST00000602312 ABCC9O60706 1549 aa26.16■■□□□ 1.78
SDR42E2-201ENST00000602312 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
SDR42E2-201ENST00000602312 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
SDR42E2-201ENST00000602312 NACADO15069 1562 aa25.64■■□□□ 1.7
SDR42E2-201ENST00000602312 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
SDR42E2-201ENST00000602312 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.66
SDR42E2-201ENST00000602312 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
SDR42E2-201ENST00000602312 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
SDR42E2-201ENST00000602312 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
SDR42E2-201ENST00000602312 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
SDR42E2-201ENST00000602312 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
SDR42E2-201ENST00000602312 RSF1Q96T23 1441 aaPredicted RBP24.7■■□□□ 1.54
SDR42E2-201ENST00000602312 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
SDR42E2-201ENST00000602312 HRCP23327 699 aa24.57■■□□□ 1.52
SDR42E2-201ENST00000602312 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
SDR42E2-201ENST00000602312 WIZO95785 1651 aa24.44■■□□□ 1.5
SDR42E2-201ENST00000602312 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
SDR42E2-201ENST00000602312 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
SDR42E2-201ENST00000602312 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
SDR42E2-201ENST00000602312 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
SDR42E2-201ENST00000602312 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
SDR42E2-201ENST00000602312 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
SDR42E2-201ENST00000602312 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
SDR42E2-201ENST00000602312 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
SDR42E2-201ENST00000602312 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
SDR42E2-201ENST00000602312 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.41
SDR42E2-201ENST00000602312 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
SDR42E2-201ENST00000602312 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
SDR42E2-201ENST00000602312 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
SDR42E2-201ENST00000602312 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
SDR42E2-201ENST00000602312 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
SDR42E2-201ENST00000602312 CC2D2AQ9P2K1 1620 aa23.61■■□□□ 1.37
SDR42E2-201ENST00000602312 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
SDR42E2-201ENST00000602312 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
SDR42E2-201ENST00000602312 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
SDR42E2-201ENST00000602312 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
SDR42E2-201ENST00000602312 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
SDR42E2-201ENST00000602312 CFTRP13569 1480 aa23.21■■□□□ 1.31
SDR42E2-201ENST00000602312 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
SDR42E2-201ENST00000602312 EHMT2Q96KQ7 1210 aa23.17■■□□□ 1.3
SDR42E2-201ENST00000602312 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
SDR42E2-201ENST00000602312 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
SDR42E2-201ENST00000602312 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
SDR42E2-201ENST00000602312 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.28
SDR42E2-201ENST00000602312 SOGA1O94964 1423 aa23.07■■□□□ 1.28
SDR42E2-201ENST00000602312 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
SDR42E2-201ENST00000602312 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
SDR42E2-201ENST00000602312 NESP48681 1621 aa23■■□□□ 1.27
SDR42E2-201ENST00000602312 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
SDR42E2-201ENST00000602312 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
SDR42E2-201ENST00000602312 CUX1P39880 1505 aa22.98■■□□□ 1.27
SDR42E2-201ENST00000602312 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
SDR42E2-201ENST00000602312 EEA1Q15075 1411 aa22.89■■□□□ 1.25
SDR42E2-201ENST00000602312 LAMC3Q9Y6N6 1575 aa22.88■■□□□ 1.25
SDR42E2-201ENST00000602312 CSRNP3Q8WYN3 585 aa22.86■■□□□ 1.25
SDR42E2-201ENST00000602312 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
SDR42E2-201ENST00000602312 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
SDR42E2-201ENST00000602312 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
SDR42E2-201ENST00000602312 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
SDR42E2-201ENST00000602312 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
SDR42E2-201ENST00000602312 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
SDR42E2-201ENST00000602312 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
SDR42E2-201ENST00000602312 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
SDR42E2-201ENST00000602312 KIF27Q86VH2 1401 aa22.64■■□□□ 1.22
SDR42E2-201ENST00000602312 KIF21BO75037 1637 aa22.64■■□□□ 1.22
SDR42E2-201ENST00000602312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
SDR42E2-201ENST00000602312 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
SDR42E2-201ENST00000602312 CUX2O14529 1486 aa22.61■■□□□ 1.21
SDR42E2-201ENST00000602312 ACIN1Q9UKV3 1341 aaKnown RBP22.58■■□□□ 1.21
SDR42E2-201ENST00000602312 RAPGEF2Q9Y4G8 1499 aa22.58■■□□□ 1.21
SDR42E2-201ENST00000602312 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
SDR42E2-201ENST00000602312 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.21
SDR42E2-201ENST00000602312 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
SDR42E2-201ENST00000602312 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
SDR42E2-201ENST00000602312 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
SDR42E2-201ENST00000602312 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
SDR42E2-201ENST00000602312 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
SDR42E2-201ENST00000602312 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
SDR42E2-201ENST00000602312 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
SDR42E2-201ENST00000602312 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
SDR42E2-201ENST00000602312 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
SDR42E2-201ENST00000602312 DIEXFQ68CQ4 756 aaKnown RBP22.42■■□□□ 1.18
SDR42E2-201ENST00000602312 IGF1RP08069 1367 aa22.42■■□□□ 1.18
SDR42E2-201ENST00000602312 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
SDR42E2-201ENST00000602312 GTF3C3Q9Y5Q9 886 aa22.4■■□□□ 1.18
SDR42E2-201ENST00000602312 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
SDR42E2-201ENST00000602312 CLIP1P30622 1438 aa22.35■■□□□ 1.17
SDR42E2-201ENST00000602312 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
SDR42E2-201ENST00000602312 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
SDR42E2-201ENST00000602312 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
SDR42E2-201ENST00000602312 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.17
SDR42E2-201ENST00000602312 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
SDR42E2-201ENST00000602312 WDR62O43379 1518 aa22.29■■□□□ 1.16
SDR42E2-201ENST00000602312 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
SDR42E2-201ENST00000602312 GAPVD1Q14C86 1478 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms