RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 NISCHQ9Y2I1 1504 aa28.3■■■□□ 2.12
LRRFIP1-204ENST00000392000 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
LRRFIP1-204ENST00000392000 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
LRRFIP1-204ENST00000392000 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
LRRFIP1-204ENST00000392000 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
LRRFIP1-204ENST00000392000 PPARGC1BQ86YN6 1023 aaKnown RBP24.2■■□□□ 1.46
LRRFIP1-204ENST00000392000 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
LRRFIP1-204ENST00000392000 HRCP23327 699 aa24.09■■□□□ 1.45
LRRFIP1-204ENST00000392000 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
LRRFIP1-204ENST00000392000 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
LRRFIP1-204ENST00000392000 LOC105371045A0A1W2PR82 267 aa23.86■■□□□ 1.41
LRRFIP1-204ENST00000392000 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
LRRFIP1-204ENST00000392000 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
LRRFIP1-204ENST00000392000 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
LRRFIP1-204ENST00000392000 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
LRRFIP1-204ENST00000392000 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
LRRFIP1-204ENST00000392000 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
LRRFIP1-204ENST00000392000 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
LRRFIP1-204ENST00000392000 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
LRRFIP1-204ENST00000392000 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
LRRFIP1-204ENST00000392000 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
LRRFIP1-204ENST00000392000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
LRRFIP1-204ENST00000392000 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
LRRFIP1-204ENST00000392000 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
LRRFIP1-204ENST00000392000 ABCC9O60706 1549 aa22.62■■□□□ 1.21
LRRFIP1-204ENST00000392000 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
LRRFIP1-204ENST00000392000 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
LRRFIP1-204ENST00000392000 YTHDC1Q96MU7 727 aaKnown RBP22.44■■□□□ 1.18
LRRFIP1-204ENST00000392000 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
LRRFIP1-204ENST00000392000 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
LRRFIP1-204ENST00000392000 GTF3C3Q9Y5Q9 886 aa22.33■■□□□ 1.16
LRRFIP1-204ENST00000392000 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
LRRFIP1-204ENST00000392000 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
LRRFIP1-204ENST00000392000 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
LRRFIP1-204ENST00000392000 ACIN1Q9UKV3 1341 aaKnown RBP22.24■■□□□ 1.15
LRRFIP1-204ENST00000392000 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
LRRFIP1-204ENST00000392000 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
LRRFIP1-204ENST00000392000 WIZO95785 1651 aa22.12■■□□□ 1.13
LRRFIP1-204ENST00000392000 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
LRRFIP1-204ENST00000392000 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
LRRFIP1-204ENST00000392000 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
LRRFIP1-204ENST00000392000 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
LRRFIP1-204ENST00000392000 SOGA1O94964 1423 aa21.89■■□□□ 1.1
LRRFIP1-204ENST00000392000 CSRNP3Q8WYN3 585 aa21.82■■□□□ 1.08
LRRFIP1-204ENST00000392000 NACADO15069 1562 aa21.82■■□□□ 1.08
LRRFIP1-204ENST00000392000 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
LRRFIP1-204ENST00000392000 CEP162Q5TB80 1403 aa21.77■■□□□ 1.08
LRRFIP1-204ENST00000392000 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
LRRFIP1-204ENST00000392000 MIER1Q8N108 512 aa21.76■■□□□ 1.07
LRRFIP1-204ENST00000392000 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
LRRFIP1-204ENST00000392000 APLP2Q06481 763 aa21.64■■□□□ 1.05
LRRFIP1-204ENST00000392000 TNIKQ9UKE5 1360 aa21.53■■□□□ 1.04
LRRFIP1-204ENST00000392000 ITGAEP38570 1179 aa21.52■■□□□ 1.04
LRRFIP1-204ENST00000392000 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
LRRFIP1-204ENST00000392000 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
LRRFIP1-204ENST00000392000 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
LRRFIP1-204ENST00000392000 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
LRRFIP1-204ENST00000392000 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
LRRFIP1-204ENST00000392000 BCANQ96GW7 911 aa21.39■■□□□ 1.01
LRRFIP1-204ENST00000392000 CLIP1P30622 1438 aa21.35■■□□□ 1.01
LRRFIP1-204ENST00000392000 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
LRRFIP1-204ENST00000392000 MYT1Q01538 1121 aa21.27■□□□□ 0.99
LRRFIP1-204ENST00000392000 KANK4Q5T7N3 995 aaPredicted RBP21.22■□□□□ 0.99
LRRFIP1-204ENST00000392000 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
LRRFIP1-204ENST00000392000 ATP1B4Q9UN42 357 aaPredicted RBP21.21■□□□□ 0.99
LRRFIP1-204ENST00000392000 EEA1Q15075 1411 aa21.2■□□□□ 0.98
LRRFIP1-204ENST00000392000 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
LRRFIP1-204ENST00000392000 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
LRRFIP1-204ENST00000392000 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
LRRFIP1-204ENST00000392000 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
LRRFIP1-204ENST00000392000 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
LRRFIP1-204ENST00000392000 SUPT16HQ9Y5B9 1047 aaKnown RBP21.11■□□□□ 0.97
LRRFIP1-204ENST00000392000 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
LRRFIP1-204ENST00000392000 P3H3Q8IVL6 736 aa21.08■□□□□ 0.97
LRRFIP1-204ENST00000392000 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
LRRFIP1-204ENST00000392000 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
LRRFIP1-204ENST00000392000 BICRAQ9NZM4 1560 aa20.99■□□□□ 0.95
LRRFIP1-204ENST00000392000 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
LRRFIP1-204ENST00000392000 FKBP8Q14318 412 aa20.95■□□□□ 0.94
LRRFIP1-204ENST00000392000 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.94
LRRFIP1-204ENST00000392000 KIF21BO75037 1637 aa20.93■□□□□ 0.94
LRRFIP1-204ENST00000392000 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
LRRFIP1-204ENST00000392000 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
LRRFIP1-204ENST00000392000 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
LRRFIP1-204ENST00000392000 SIN3AQ96ST3 1273 aa20.87■□□□□ 0.93
LRRFIP1-204ENST00000392000 NEFLP07196 543 aa20.8■□□□□ 0.92
LRRFIP1-204ENST00000392000 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
LRRFIP1-204ENST00000392000 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
LRRFIP1-204ENST00000392000 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.91
LRRFIP1-204ENST00000392000 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
LRRFIP1-204ENST00000392000 ANP32EQ9BTT0 268 aa20.7■□□□□ 0.9
LRRFIP1-204ENST00000392000 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
LRRFIP1-204ENST00000392000 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
LRRFIP1-204ENST00000392000 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
LRRFIP1-204ENST00000392000 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
LRRFIP1-204ENST00000392000 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
LRRFIP1-204ENST00000392000 CUX1P39880 1505 aa20.62■□□□□ 0.89
LRRFIP1-204ENST00000392000 CUX2O14529 1486 aa20.61■□□□□ 0.89
LRRFIP1-204ENST00000392000 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
LRRFIP1-204ENST00000392000 ARHGAP35Q9NRY4 1499 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms