RNA–Protein interactions for RNA: ENST00000368352.9

RUSC1-204, Transcript of RUN and SH3 domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUSC1, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUSC1-204ENST00000368352 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
RUSC1-204ENST00000368352 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
RUSC1-204ENST00000368352 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
RUSC1-204ENST00000368352 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
RUSC1-204ENST00000368352 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
RUSC1-204ENST00000368352 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
RUSC1-204ENST00000368352 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
RUSC1-204ENST00000368352 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
RUSC1-204ENST00000368352 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
RUSC1-204ENST00000368352 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
RUSC1-204ENST00000368352 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
RUSC1-204ENST00000368352 HRCP23327 699 aa23.71■■□□□ 1.39
RUSC1-204ENST00000368352 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
RUSC1-204ENST00000368352 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
RUSC1-204ENST00000368352 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
RUSC1-204ENST00000368352 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
RUSC1-204ENST00000368352 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
RUSC1-204ENST00000368352 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
RUSC1-204ENST00000368352 ABCC9O60706 1549 aa22.89■■□□□ 1.26
RUSC1-204ENST00000368352 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
RUSC1-204ENST00000368352 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
RUSC1-204ENST00000368352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
RUSC1-204ENST00000368352 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
RUSC1-204ENST00000368352 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
RUSC1-204ENST00000368352 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
RUSC1-204ENST00000368352 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.19
RUSC1-204ENST00000368352 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
RUSC1-204ENST00000368352 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
RUSC1-204ENST00000368352 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
RUSC1-204ENST00000368352 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
RUSC1-204ENST00000368352 WIZO95785 1651 aa22.22■■□□□ 1.15
RUSC1-204ENST00000368352 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
RUSC1-204ENST00000368352 HNRNPUL2Q1KMD3 747 aaKnown RBP22.09■■□□□ 1.13
RUSC1-204ENST00000368352 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
RUSC1-204ENST00000368352 YTHDC1Q96MU7 727 aaKnown RBP22.04■■□□□ 1.12
RUSC1-204ENST00000368352 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
RUSC1-204ENST00000368352 NACADO15069 1562 aa21.99■■□□□ 1.11
RUSC1-204ENST00000368352 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
RUSC1-204ENST00000368352 SOGA1O94964 1423 aa21.99■■□□□ 1.11
RUSC1-204ENST00000368352 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
RUSC1-204ENST00000368352 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
RUSC1-204ENST00000368352 RUSC2Q8N2Y8 1516 aa21.88■■□□□ 1.09
RUSC1-204ENST00000368352 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
RUSC1-204ENST00000368352 APLP2Q06481 763 aa21.81■■□□□ 1.08
RUSC1-204ENST00000368352 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
RUSC1-204ENST00000368352 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
RUSC1-204ENST00000368352 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
RUSC1-204ENST00000368352 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
RUSC1-204ENST00000368352 ITGAEP38570 1179 aa21.65■■□□□ 1.06
RUSC1-204ENST00000368352 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
RUSC1-204ENST00000368352 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
RUSC1-204ENST00000368352 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
RUSC1-204ENST00000368352 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
RUSC1-204ENST00000368352 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
RUSC1-204ENST00000368352 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
RUSC1-204ENST00000368352 MIER1Q8N108 512 aa21.54■■□□□ 1.04
RUSC1-204ENST00000368352 CLIP1P30622 1438 aa21.45■■□□□ 1.02
RUSC1-204ENST00000368352 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
RUSC1-204ENST00000368352 ATP1B4Q9UN42 357 aaPredicted RBP21.44■■□□□ 1.02
RUSC1-204ENST00000368352 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
RUSC1-204ENST00000368352 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
RUSC1-204ENST00000368352 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
RUSC1-204ENST00000368352 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
RUSC1-204ENST00000368352 EEA1Q15075 1411 aa21.3■■□□□ 1
RUSC1-204ENST00000368352 P3H3Q8IVL6 736 aa21.27■■□□□ 1
RUSC1-204ENST00000368352 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
RUSC1-204ENST00000368352 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
RUSC1-204ENST00000368352 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
RUSC1-204ENST00000368352 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
RUSC1-204ENST00000368352 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
RUSC1-204ENST00000368352 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
RUSC1-204ENST00000368352 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
RUSC1-204ENST00000368352 FAM50AQ14320 339 aaKnown RBP21.1■□□□□ 0.97
RUSC1-204ENST00000368352 HIRIP3Q9BW71 556 aaPredicted RBP21.1■□□□□ 0.97
RUSC1-204ENST00000368352 KCNH8Q96L42 1107 aa21■□□□□ 0.95
RUSC1-204ENST00000368352 BCANQ96GW7 911 aa20.99■□□□□ 0.95
RUSC1-204ENST00000368352 KIF21BO75037 1637 aa20.99■□□□□ 0.95
RUSC1-204ENST00000368352 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
RUSC1-204ENST00000368352 DHX57Q6P158 1386 aaKnown RBP20.94■□□□□ 0.94
RUSC1-204ENST00000368352 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
RUSC1-204ENST00000368352 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
RUSC1-204ENST00000368352 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
RUSC1-204ENST00000368352 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
RUSC1-204ENST00000368352 CCNB3Q8WWL7 1395 aa20.8■□□□□ 0.92
RUSC1-204ENST00000368352 CUX2O14529 1486 aa20.76■□□□□ 0.91
RUSC1-204ENST00000368352 SUPT16HQ9Y5B9 1047 aaKnown RBP20.74■□□□□ 0.91
RUSC1-204ENST00000368352 RAB3GAP2Q9H2M9 1393 aa20.74■□□□□ 0.91
RUSC1-204ENST00000368352 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
RUSC1-204ENST00000368352 PRXQ9BXM0 1461 aa20.73■□□□□ 0.91
RUSC1-204ENST00000368352 CUX1P39880 1505 aa20.72■□□□□ 0.91
RUSC1-204ENST00000368352 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
RUSC1-204ENST00000368352 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
RUSC1-204ENST00000368352 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
RUSC1-204ENST00000368352 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
RUSC1-204ENST00000368352 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
RUSC1-204ENST00000368352 IGF1RP08069 1367 aa20.65■□□□□ 0.9
RUSC1-204ENST00000368352 FKBP8Q14318 412 aa20.63■□□□□ 0.89
RUSC1-204ENST00000368352 CHIC2Q9UKJ5 165 aa20.62■□□□□ 0.89
RUSC1-204ENST00000368352 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
RUSC1-204ENST00000368352 PHLDB1Q86UU1 1377 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms