RNA–Protein interactions for RNA: ENST00000368382.5

TRIM46-202, Transcript of tripartite motif containing 46, humanhuman

TSL 2 BASIC

Gene TRIM46, Length 3,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-202ENST00000368382 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
TRIM46-202ENST00000368382 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
TRIM46-202ENST00000368382 ABCC9O60706 1549 aa25.14■■□□□ 1.61
TRIM46-202ENST00000368382 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
TRIM46-202ENST00000368382 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
TRIM46-202ENST00000368382 HRCP23327 699 aa24.79■■□□□ 1.56
TRIM46-202ENST00000368382 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
TRIM46-202ENST00000368382 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
TRIM46-202ENST00000368382 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
TRIM46-202ENST00000368382 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
TRIM46-202ENST00000368382 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
TRIM46-202ENST00000368382 DCAF1Q9Y4B6 1507 aa24.27■■□□□ 1.48
TRIM46-202ENST00000368382 NACADO15069 1562 aa24.2■■□□□ 1.46
TRIM46-202ENST00000368382 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
TRIM46-202ENST00000368382 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
TRIM46-202ENST00000368382 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
TRIM46-202ENST00000368382 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
TRIM46-202ENST00000368382 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
TRIM46-202ENST00000368382 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
TRIM46-202ENST00000368382 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
TRIM46-202ENST00000368382 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
TRIM46-202ENST00000368382 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
TRIM46-202ENST00000368382 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
TRIM46-202ENST00000368382 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
TRIM46-202ENST00000368382 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
TRIM46-202ENST00000368382 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
TRIM46-202ENST00000368382 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
TRIM46-202ENST00000368382 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
TRIM46-202ENST00000368382 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
TRIM46-202ENST00000368382 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.24
TRIM46-202ENST00000368382 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
TRIM46-202ENST00000368382 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
TRIM46-202ENST00000368382 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
TRIM46-202ENST00000368382 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
TRIM46-202ENST00000368382 WIZO95785 1651 aa22.67■■□□□ 1.22
TRIM46-202ENST00000368382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
TRIM46-202ENST00000368382 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
TRIM46-202ENST00000368382 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
TRIM46-202ENST00000368382 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
TRIM46-202ENST00000368382 MYT1Q01538 1121 aa22.56■■□□□ 1.2
TRIM46-202ENST00000368382 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
TRIM46-202ENST00000368382 CC2D2AQ9P2K1 1620 aa22.56■■□□□ 1.2
TRIM46-202ENST00000368382 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
TRIM46-202ENST00000368382 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
TRIM46-202ENST00000368382 GTF3C3Q9Y5Q9 886 aa22.5■■□□□ 1.19
TRIM46-202ENST00000368382 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
TRIM46-202ENST00000368382 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
TRIM46-202ENST00000368382 WRNQ14191 1432 aaPredicted RBP eCLIP22.42■■□□□ 1.18
TRIM46-202ENST00000368382 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
TRIM46-202ENST00000368382 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.17
TRIM46-202ENST00000368382 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
TRIM46-202ENST00000368382 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
TRIM46-202ENST00000368382 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
TRIM46-202ENST00000368382 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
TRIM46-202ENST00000368382 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
TRIM46-202ENST00000368382 TNIKQ9UKE5 1360 aa22.15■■□□□ 1.14
TRIM46-202ENST00000368382 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
TRIM46-202ENST00000368382 EEA1Q15075 1411 aa22.02■■□□□ 1.12
TRIM46-202ENST00000368382 SOGA1O94964 1423 aa22.01■■□□□ 1.11
TRIM46-202ENST00000368382 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
TRIM46-202ENST00000368382 MIER1Q8N108 512 aa21.97■■□□□ 1.11
TRIM46-202ENST00000368382 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
TRIM46-202ENST00000368382 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
TRIM46-202ENST00000368382 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
TRIM46-202ENST00000368382 NESP48681 1621 aa21.91■■□□□ 1.1
TRIM46-202ENST00000368382 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
TRIM46-202ENST00000368382 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
TRIM46-202ENST00000368382 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
TRIM46-202ENST00000368382 CFTRP13569 1480 aa21.82■■□□□ 1.08
TRIM46-202ENST00000368382 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
TRIM46-202ENST00000368382 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
TRIM46-202ENST00000368382 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
TRIM46-202ENST00000368382 KIF21BO75037 1637 aa21.69■■□□□ 1.06
TRIM46-202ENST00000368382 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
TRIM46-202ENST00000368382 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
TRIM46-202ENST00000368382 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
TRIM46-202ENST00000368382 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
TRIM46-202ENST00000368382 CLIP1P30622 1438 aa21.63■■□□□ 1.05
TRIM46-202ENST00000368382 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
TRIM46-202ENST00000368382 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
TRIM46-202ENST00000368382 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
TRIM46-202ENST00000368382 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
TRIM46-202ENST00000368382 APLP2Q06481 763 aa21.48■■□□□ 1.03
TRIM46-202ENST00000368382 KIF21AQ7Z4S6 1674 aa21.45■■□□□ 1.02
TRIM46-202ENST00000368382 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
TRIM46-202ENST00000368382 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
TRIM46-202ENST00000368382 CUX1P39880 1505 aa21.42■■□□□ 1.02
TRIM46-202ENST00000368382 TSHZ2Q9NRE2 1034 aa21.39■■□□□ 1.01
TRIM46-202ENST00000368382 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
TRIM46-202ENST00000368382 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
TRIM46-202ENST00000368382 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
TRIM46-202ENST00000368382 ANP32EQ9BTT0 268 aa21.31■■□□□ 1
TRIM46-202ENST00000368382 CUX2O14529 1486 aa21.31■■□□□ 1
TRIM46-202ENST00000368382 TOP2BQ02880 1626 aa21.3■■□□□ 1
TRIM46-202ENST00000368382 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
TRIM46-202ENST00000368382 RRBP1Q9P2E9 1410 aaKnown RBP21.28■■□□□ 1
TRIM46-202ENST00000368382 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
TRIM46-202ENST00000368382 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
TRIM46-202ENST00000368382 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
TRIM46-202ENST00000368382 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms