RNA–Protein interactions for RNA: ENST00000357542.8

RHD-203, Transcript of Rh blood group D antigen, humanhuman

TSL 1 (best) BASIC

Gene RHD, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHD-203ENST00000357542 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
RHD-203ENST00000357542 CCDC180Q9P1Z9 1646 aa31.87■■■□□ 2.69
RHD-203ENST00000357542 ABCC9O60706 1549 aa31.75■■■□□ 2.67
RHD-203ENST00000357542 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
RHD-203ENST00000357542 NACADO15069 1562 aa30.09■■■□□ 2.41
RHD-203ENST00000357542 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
RHD-203ENST00000357542 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
RHD-203ENST00000357542 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
RHD-203ENST00000357542 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
RHD-203ENST00000357542 BICRAQ9NZM4 1560 aa29.46■■■□□ 2.31
RHD-203ENST00000357542 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
RHD-203ENST00000357542 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
RHD-203ENST00000357542 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
RHD-203ENST00000357542 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
RHD-203ENST00000357542 SCRIBQ14160 1630 aa28.88■■■□□ 2.21
RHD-203ENST00000357542 CC2D2AQ9P2K1 1620 aa28.77■■■□□ 2.2
RHD-203ENST00000357542 EIF4G1Q04637 1599 aaKnown RBP28.7■■■□□ 2.19
RHD-203ENST00000357542 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
RHD-203ENST00000357542 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
RHD-203ENST00000357542 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
RHD-203ENST00000357542 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
RHD-203ENST00000357542 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
RHD-203ENST00000357542 SMARCA2P51531 1590 aa27.57■■■□□ 2
RHD-203ENST00000357542 CUX2O14529 1486 aa27.52■■■□□ 2
RHD-203ENST00000357542 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
RHD-203ENST00000357542 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
RHD-203ENST00000357542 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
RHD-203ENST00000357542 ERCC6Q03468 1493 aa27.41■■□□□ 1.98
RHD-203ENST00000357542 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
RHD-203ENST00000357542 NESP48681 1621 aa27.27■■□□□ 1.96
RHD-203ENST00000357542 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
RHD-203ENST00000357542 LAMC3Q9Y6N6 1575 aa27.17■■□□□ 1.94
RHD-203ENST00000357542 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
RHD-203ENST00000357542 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
RHD-203ENST00000357542 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
RHD-203ENST00000357542 WIZO95785 1651 aa26.86■■□□□ 1.89
RHD-203ENST00000357542 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.89
RHD-203ENST00000357542 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
RHD-203ENST00000357542 WDR62O43379 1518 aa26.74■■□□□ 1.87
RHD-203ENST00000357542 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
RHD-203ENST00000357542 CFTRP13569 1480 aa26.56■■□□□ 1.84
RHD-203ENST00000357542 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
RHD-203ENST00000357542 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
RHD-203ENST00000357542 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
RHD-203ENST00000357542 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
RHD-203ENST00000357542 URB2Q14146 1524 aaKnown RBP26.35■■□□□ 1.81
RHD-203ENST00000357542 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
RHD-203ENST00000357542 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
RHD-203ENST00000357542 IFT140Q96RY7 1462 aa26.07■■□□□ 1.76
RHD-203ENST00000357542 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
RHD-203ENST00000357542 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
RHD-203ENST00000357542 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
RHD-203ENST00000357542 ABCC8Q09428 1581 aa26■■□□□ 1.75
RHD-203ENST00000357542 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
RHD-203ENST00000357542 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
RHD-203ENST00000357542 RIMBP3CA6NJZ7 1639 aa25.9■■□□□ 1.74
RHD-203ENST00000357542 RIMBP3BA6NNM3 1639 aa25.9■■□□□ 1.74
RHD-203ENST00000357542 RIMBP3Q9UFD9 1639 aa25.9■■□□□ 1.74
RHD-203ENST00000357542 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
RHD-203ENST00000357542 ARHGEF11O15085 1522 aa25.8■■□□□ 1.72
RHD-203ENST00000357542 POLA1P09884 1462 aaPredicted RBP25.78■■□□□ 1.72
RHD-203ENST00000357542 CHD1O14646 1710 aa25.77■■□□□ 1.72
RHD-203ENST00000357542 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.71
RHD-203ENST00000357542 WDR97A6NE52 1622 aa25.69■■□□□ 1.7
RHD-203ENST00000357542 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
RHD-203ENST00000357542 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
RHD-203ENST00000357542 SOGA1O94964 1423 aa25.57■■□□□ 1.68
RHD-203ENST00000357542 CUX1P39880 1505 aa25.57■■□□□ 1.68
RHD-203ENST00000357542 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
RHD-203ENST00000357542 SNAPC4Q5SXM2 1469 aa25.51■■□□□ 1.67
RHD-203ENST00000357542 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
RHD-203ENST00000357542 CLASP1Q7Z460 1538 aa25.5■■□□□ 1.67
RHD-203ENST00000357542 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
RHD-203ENST00000357542 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
RHD-203ENST00000357542 SYNJ1O43426 1573 aa25.42■■□□□ 1.66
RHD-203ENST00000357542 FBLN2P98095 1184 aa25.42■■□□□ 1.66
RHD-203ENST00000357542 CYB5RLQ6IPT4 315 aa25.42■■□□□ 1.66
RHD-203ENST00000357542 PBRM1Q86U86 1689 aa25.41■■□□□ 1.66
RHD-203ENST00000357542 SYNJ2O15056 1496 aa25.38■■□□□ 1.65
RHD-203ENST00000357542 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
RHD-203ENST00000357542 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
RHD-203ENST00000357542 GAPVD1Q14C86 1478 aa25.31■■□□□ 1.64
RHD-203ENST00000357542 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
RHD-203ENST00000357542 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
RHD-203ENST00000357542 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
RHD-203ENST00000357542 ADAMTS12P58397 1594 aa25.15■■□□□ 1.62
RHD-203ENST00000357542 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
RHD-203ENST00000357542 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
RHD-203ENST00000357542 TRHP20396 242 aaPredicted RBP25.12■■□□□ 1.61
RHD-203ENST00000357542 NUP160Q12769 1436 aa25.07■■□□□ 1.6
RHD-203ENST00000357542 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
RHD-203ENST00000357542 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
RHD-203ENST00000357542 SHROOM2Q13796 1616 aa25.04■■□□□ 1.6
RHD-203ENST00000357542 ERICH3Q5RHP9 1530 aa25.03■■□□□ 1.6
RHD-203ENST00000357542 ERCC6L2Q5T890 1561 aa25.01■■□□□ 1.59
RHD-203ENST00000357542 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
RHD-203ENST00000357542 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
RHD-203ENST00000357542 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
RHD-203ENST00000357542 KIF13AQ9H1H9 1805 aa24.73■■□□□ 1.55
RHD-203ENST00000357542 CUL7Q14999 1698 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms